| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_04010 |
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| Symbol | |
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| ID | 7314076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 410301 |
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| End bp | 411971 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643610825 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002508155 |
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| Protein GI | 220931247 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000479519 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTTA AAAAAGGTTA CTTGTGTACA TATTTAACAA TTTTTGTTGT AGTAACCGGT
TTTATGTTTT TAATTAATAT TCAAACCACC CGACTCCTCA GTAATGACAA GATTTATAAA
ATTGTTAATT ATAGTTTAGA TGGTAGTTCC GATGATTTAC ATTATCGTTT GCTGGAAGAA
GGACAGCGCC TTTTCAAATT TAAGACAATT ATCCCTGAAT CAAAACTGCC AGCAACACTG
GATGGAAACT ATAAAATTAT TATTCATCGT CTGGCTGGTC AGTGGTATCG TGTTTATATA
AATGATGTCT TAATAGGGAG CCTGGGTGAC ATCAAAAAAG GATACAGCAA TATCTGGAAT
GCTTTTGGTG TTTATGACCT TGATCAGGAT TTGTTACAGG AAAGAAATGA ATTAGTGATA
GAAGTATATG GGCTCTATGA AGTTGGTTTA TTGGGTTATC CTGTTATGAT AACTGATAAT
GTGACCGCCA ACAGGTTATC AAACTGGTTT ATAATATTAA TTCGTAACAT AAAACTAGTT
GCCATCGGTG TTTTGTTAAC AGCATTTATT ATATTAATTC TTCTTATAAA AATGTCTAAA
AAAATAAAAA GGGAATACGT CTACTATGCT CTGGGGGCTT TTACAATTAT TTTTATGGTC
CTGGATTACC AGGTTATGTA CAGGCTACCT GTTCCCCCTA TTTTATTTAA AAAGTTTATT
ATATCAGGTA TTTATCTGGC CAGTTTCTTT ATTTCGATTG GTTTATATAA GCAATTTAAG
GTTCAATTAA ATCTGGTTCT GGGATTAATG GTACTGGGCA GTGCAGGTTA TCTTATTATC
TTTCCCGGGA ATATGGTAGA TTTTAAGAAG TCTTATAGCT TATTAAATCT TTTAATTTCT
TTAAATGTCC TGGGATGGTT TTATGCCGGG GCTTTAAATT TTAAAAAGTC CCTCTATGCC
CGGGTTTTTT CTATCTGCAG TTTTGTTTTA TTTGTCCTGG CCAGCTGTGA TATTTACCAT
ATTTTGATGA ATAGAGGCTT TGTTATATCA ATGTCTATTA TTGGGGTGGC TGTTTTCTCT
ATAGGGATAG TTTTCTTGAT AATCATTGAT TATATAATAA TGCAGGGTCA GGTAGTATAT
GAGAAGAAAA AATCCCGCTT TTTTTATGAA AAATCTATCA GGGATAGCAT GACCGGGATT
TATAACCACC ATTATATTGT TTCGACTTTG TCCAGGATGA AAGAACCTTT TTCCCTGGTT
GTTCTTGATC TTGATAATTT CAAGAATATA AATGACACTT ATGGGCATCT GGCTGGTGAT
GAAGTCATTA AAAATGTTGC TATTAATTTA CAAAACAGTA TCCGCAAATA TGATTATGTG
GGAAGGTATG GCGGGGATGA ATTTGTAATT ATTTTAATGA ACTGTTCTTT AGATGAACTT
AAAATGATGG CTAAAAAAAT AAAAAGAGCT GTTGAAGAAC CTGTGTATAA GTATAAGGGT
AATAAAATCA GGGTGACTGC CTCTATGGGC ATATATAATG CAACAGAAAA AGAGGAAGGC
GAACAGGTTA TTTACCGGGC AGATCAGGCC CTGTATGCGG CCAAAAAAAG TGGTAGGTCC
GGTATAAAAA TGTGGACAAA ATCTGAATTT AGTGATGAGA GGGGGGAATA A
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| Protein sequence | MKFKKGYLCT YLTIFVVVTG FMFLINIQTT RLLSNDKIYK IVNYSLDGSS DDLHYRLLEE
GQRLFKFKTI IPESKLPATL DGNYKIIIHR LAGQWYRVYI NDVLIGSLGD IKKGYSNIWN
AFGVYDLDQD LLQERNELVI EVYGLYEVGL LGYPVMITDN VTANRLSNWF IILIRNIKLV
AIGVLLTAFI ILILLIKMSK KIKREYVYYA LGAFTIIFMV LDYQVMYRLP VPPILFKKFI
ISGIYLASFF ISIGLYKQFK VQLNLVLGLM VLGSAGYLII FPGNMVDFKK SYSLLNLLIS
LNVLGWFYAG ALNFKKSLYA RVFSICSFVL FVLASCDIYH ILMNRGFVIS MSIIGVAVFS
IGIVFLIIID YIIMQGQVVY EKKKSRFFYE KSIRDSMTGI YNHHYIVSTL SRMKEPFSLV
VLDLDNFKNI NDTYGHLAGD EVIKNVAINL QNSIRKYDYV GRYGGDEFVI ILMNCSLDEL
KMMAKKIKRA VEEPVYKYKG NKIRVTASMG IYNATEKEEG EQVIYRADQA LYAAKKSGRS
GIKMWTKSEF SDERGE
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