| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03970 |
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| Symbol | |
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| ID | 7314072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 407226 |
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| End bp | 407813 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643610821 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002508151 |
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| Protein GI | 220931243 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.000171758 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATGGAA CATCTGATGA GAAGATAATC AATATGATTT TAGCTGGAGA AAAAGAACTG
TTTGCCAGGC TGGTGGAAAA ATATCAGAGA AAAGTCTATA ATACCACCTA CCGGATGTTA
GGCAACAGTG AAGATGCCAG TGACCTGACC CAGGAGGCCT TTATAAAAAC CTTCAGGAAT
CTGAAACGGT TTAGAGGGAA GGCCAGTTTT TCAACCTGGC TTTTTACCAT AACAACAAAT
TTGTGCCGGG ACGAGCTGCG GAAACGTCAG CGTCGTAGTG CTAGTCCCCA TTTCCCTGAT
GGGCAACATT TTATGAGTGA GGATATTGAA AACATCAAAG ATAATTCAAA AGTTCCCGAA
GACCTCTACA TGGGTAGGGA AACCATGGCT TCAATCCAGA GGGCTATTAA TAAATTACCA
GCTGATCAAA AAGAAGTAAT AGTGTTAAGA GATATACAGG GGTTTAGCTA TAAAGAGATT
TCAGAAATTA TAGGAGTTCC GATGGGAACT GTTAAATCGC GTTTGAGCAG GGCCAGGAAG
TCTTTACAGA AACACCTCAA AAATATAGAA GGGAGGGGTT TAAAATGA
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| Protein sequence | MDGTSDEKII NMILAGEKEL FARLVEKYQR KVYNTTYRML GNSEDASDLT QEAFIKTFRN
LKRFRGKASF STWLFTITTN LCRDELRKRQ RRSASPHFPD GQHFMSEDIE NIKDNSKVPE
DLYMGRETMA SIQRAINKLP ADQKEVIVLR DIQGFSYKEI SEIIGVPMGT VKSRLSRARK
SLQKHLKNIE GRGLK
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