Gene Hore_03790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03790 
Symbol 
ID7314054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp391924 
End bp392601 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content39% 
IMG OID643610804 
Productcytochrome c assembly protein 
Protein accessionYP_002508134 
Protein GI220931226 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA AGGTTAATTC TATACTTCTG ATTATACTTA TTTTCACAAT GTTAACCAAC 
CTGTATCTTA TATTTTACTA TGCCCCCCTG GAAAAGGTGA TGGGGGTGGT TCAGAAGATA
TTTTATTTTC ATGTTGCGTC TGCCTGGATT GGTTTTCTGG CTCTGGCAGT TGTTTTTGCA
TCTAATATTC TCTACCTCAG ATGTGGCCGG AAAAAGTGGA GTCAGTTGTC ACTGGCTTCT
GCCGAGATAG GGGTTGTTTT TATAAGTATA GTCCTGATTA CCGGTCCTTT ATGGGCAAAG
CCTGTCTGGA ATACCTGGTG GACCTGGGAT CCCAGGTTAA CGACAACTCT TATTCTATGG
TTTATGTATG TAGCCTATCT TATCTTACAT GGTGGCCGGG AAAAGAATGA AAAGAGAGAA
CGACTGGCAG CTGTTTACGG GATTATAGCC TTTATCAATG TCCCCCTGGT TTTTTTCTCT
ATAAGATGGT GGCGGACTAT CCACCCGGTA GTTATTTCAA CATCAGGTAT AAGTATAACC
GGAGAAATGT TATTTACCCT TCTTTTCAGT CTTGCTACCT TTACGTTATT ATATGTTTAT
TTGCTCAAAA CAAGGTGCAG GGGAATTAAG CTGGCTTATA AAATTGATTT ATTAAAAGAA
AGAATAGGAG GGTATTAA
 
Protein sequence
MKDKVNSILL IILIFTMLTN LYLIFYYAPL EKVMGVVQKI FYFHVASAWI GFLALAVVFA 
SNILYLRCGR KKWSQLSLAS AEIGVVFISI VLITGPLWAK PVWNTWWTWD PRLTTTLILW
FMYVAYLILH GGREKNEKRE RLAAVYGIIA FINVPLVFFS IRWWRTIHPV VISTSGISIT
GEMLFTLLFS LATFTLLYVY LLKTRCRGIK LAYKIDLLKE RIGGY