Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_03790 |
Symbol | |
ID | 7314054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 391924 |
End bp | 392601 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643610804 |
Product | cytochrome c assembly protein |
Protein accession | YP_002508134 |
Protein GI | 220931226 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGATA AGGTTAATTC TATACTTCTG ATTATACTTA TTTTCACAAT GTTAACCAAC CTGTATCTTA TATTTTACTA TGCCCCCCTG GAAAAGGTGA TGGGGGTGGT TCAGAAGATA TTTTATTTTC ATGTTGCGTC TGCCTGGATT GGTTTTCTGG CTCTGGCAGT TGTTTTTGCA TCTAATATTC TCTACCTCAG ATGTGGCCGG AAAAAGTGGA GTCAGTTGTC ACTGGCTTCT GCCGAGATAG GGGTTGTTTT TATAAGTATA GTCCTGATTA CCGGTCCTTT ATGGGCAAAG CCTGTCTGGA ATACCTGGTG GACCTGGGAT CCCAGGTTAA CGACAACTCT TATTCTATGG TTTATGTATG TAGCCTATCT TATCTTACAT GGTGGCCGGG AAAAGAATGA AAAGAGAGAA CGACTGGCAG CTGTTTACGG GATTATAGCC TTTATCAATG TCCCCCTGGT TTTTTTCTCT ATAAGATGGT GGCGGACTAT CCACCCGGTA GTTATTTCAA CATCAGGTAT AAGTATAACC GGAGAAATGT TATTTACCCT TCTTTTCAGT CTTGCTACCT TTACGTTATT ATATGTTTAT TTGCTCAAAA CAAGGTGCAG GGGAATTAAG CTGGCTTATA AAATTGATTT ATTAAAAGAA AGAATAGGAG GGTATTAA
|
Protein sequence | MKDKVNSILL IILIFTMLTN LYLIFYYAPL EKVMGVVQKI FYFHVASAWI GFLALAVVFA SNILYLRCGR KKWSQLSLAS AEIGVVFISI VLITGPLWAK PVWNTWWTWD PRLTTTLILW FMYVAYLILH GGREKNEKRE RLAAVYGIIA FINVPLVFFS IRWWRTIHPV VISTSGISIT GEMLFTLLFS LATFTLLYVY LLKTRCRGIK LAYKIDLLKE RIGGY
|
| |