Gene Hore_03730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03730 
Symbol 
ID7314048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp386416 
End bp387063 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content36% 
IMG OID643610798 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002508128 
Protein GI220931220 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTTAA AGACATATTA TAACCTTCCT GAAGAAAAAC AAAAACGAAT AATTAAAGCA 
GCTATTGCCG AATTTGCCAG TAACGGCTAT CAAAAGGGTT CTATTCAGTC TATAGCTGAC 
AGGGCCGGGA TCTCTAAAGG GAGTATGTAC CAGTACTTCA CTAACAAGAA AGAGCTATTC 
CTCTACATAT TTGATATAGC CATAGATAAG AAAATTAATG GTGTTAAAAA TATTATTTCC 
AGATACAGGA AACTAACTAT ATATGAATTA CTGGAAAAGG CTTTTGAAGA TTCAATTAAA 
TACGCCCGGG AATACCCTTC TCTCTATCAA ATTTATACCC GGGCAATAAA GGGAGCACCC 
CGGGAAATTA TTAACAGTCT TGATTTTAAA ATAAAAACCG AAGGTTTATC GTTTTATCTA 
AAACTACTTA CAGAAGCCAG GGAAAATGGG CAGGTCAGAG ATGATATAAA TCTGGAACTG 
GCAACATTTG TGGTCTTTAC CCTCTGTAAG TACTTCGGTG AATATCTGGG CCAGAAAATA 
CCCCGGAGTT CTGAAAAGGA AATAAAACAT AATGTTAGGG ATTTTTTAAA GGTCCTCAAA 
GAGGGTCTCT TACCACAAGA ACATGAGGAG GTATGTAAAA ATGATTGA
 
Protein sequence
MPLKTYYNLP EEKQKRIIKA AIAEFASNGY QKGSIQSIAD RAGISKGSMY QYFTNKKELF 
LYIFDIAIDK KINGVKNIIS RYRKLTIYEL LEKAFEDSIK YAREYPSLYQ IYTRAIKGAP 
REIINSLDFK IKTEGLSFYL KLLTEARENG QVRDDINLEL ATFVVFTLCK YFGEYLGQKI 
PRSSEKEIKH NVRDFLKVLK EGLLPQEHEE VCKND