| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03670 |
|---|
| Symbol | |
|---|
| ID | 7314042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 377424 |
|---|
| End bp | 380498 |
|---|
| Gene Length | 3075 bp |
|---|
| Protein Length | 1024 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643610793 |
|---|
| Product | glycoside hydrolase family 31 |
|---|
| Protein accession | YP_002508123 |
|---|
| Protein GI | 220931215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.510709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGG ACAACTATAA TGTTGTTTTC AATATTCTTG AAGGTGAAGT GTTGCATATT
CAAATTCAGG ATAAAAATAA TAAATCACCC TTTTTAAGGG TAACAGGGGG AGAGAAAGTT
CTTAAATCAA TCGATTATCA TCAGGTTGAT AGTCGGGAGA TAATCCCTGT TTCAGAAAGG
TATAATCTTG AAATAAATAA AGACAGAGAA AGTTTTAAAA TATTTGATAA AACCCGTCAG
AAGATTGTAT TAGAGAGTTA TGACAGCTTT TTCCGCAAGG TAGATGAGAA GCAAAAAGGC
CTTTCTCTGT CCATTAAAGA AAATGAGCTT TTTACAGGGC TGGGGCAGGA TGTAGAGGGC
AAGTTATATA TAGAGGATAT TGAAAGAAGA TGCTGGAATG AGTGGAATGG GTACGATTAT
CTTGGATCCA ACTCGGTACC TTTTTATTTA TCCAATCAGG GTTATGGCCT TTATTTAGAT
ACAACCTATC CTTCCCGTTT TGTTTTCGGA AAAGGAGAGA TCCAGCCAAA ACCAATTGCC
CATGAAGTAA TGGCTGAAAC TCCTTTTGAC TGGGAAGAGA AGGCCTGTGT AAATGCTGAA
GATCAATTAA CTATTCTGGG CTGGGAAGAG GAACAGTTGG ATTTTTATAT CTTATTGGGA
GATATGGCTG AAATTGAACA AAAGTATTAC CAGCTGACAG GTAAACCCAG TCTTTTGCCC
AAATGGTCAT TGGGATATAT CCAGTGTAAA AATAGATATA AGAGTGAAGA AGAAATTTTA
CACATTGCCA GAAAAATGAG GGAAAAGGGA ATACCCTGTG ATGTTATTGT TATTGACTGG
CTCTGGTTTA AAGAATTTGG AGATTTATAC TGGGATGGGG AAAACTACTC AGAAAAGATG
GCTGAAACCA TCAAAAAACT TAAGGATATG GGTATTAAAA TTTTACTGGC TGTCCATCCT
TTTGTCGATT ATTCCAGTAA AAATTATAAA GAATTGAGTG AAAAAGGTTG CCTGTCAAAG
GTACCCGAGG GGGGGCGGCC TTATTTCGAC CATACTAATC CTGCTACCAA GGAGGCCATG
TGGAAGTTTT ATCAAAAGCT ATATGATGAA GGTGTAGCTG GATGGTGGAC AGATATGGGT
GAACCAGAAT CAGACTTACC TGGTACACAA GGATATGCCG GTAAAAGAGA GGTCTACCAT
AATGTCTATA CCCTGCTATG GAGTAAAAAT ATCATGGAAG CCCAGCGGGA AAATACCGGA
AGCCGAAATT TCTGTCTGGC CCGTACCAAT GCCCTGGGGA TACAGAATTA CAATACCGCA
TACTGGACAG GGGATATCTT TGCTACCTGG GAAATTTATC GTCGTAACAT TAAGGCCCTT
CAGACTGTCT CTGTGTCCGG ACAACCATAT GTTTGTACTG ATATAGGTGG TTTCCATACC
GATGAACGCT TTACTCCGGA ATTATATGTT CGCTGGTTGC AGTGGGGTGT ATTTGCCGGG
TTATTCAGGG TCCATGGTGT TAAACCCGAA AATGAACCCT GGTCTCTGGG AGAATCTAAT
GAAAAGATCA TTAAGAAGAT AATCGAATTT AGATACAGGT TTATTCCCTA TATTTATGAA
AAGATGTATC AAATGCAGCA AAACGGCGAA GCATTTATTA GACCCCTGAT TTATGATTAC
CCACAGGATG AAAAAGCTAT AGAAAGGGAG TATCAGTATC TCTTTGGGGA TATACTGGTC
TGCCCTGTAG TTGAACCTGA TGTCAGGGAG ATCGATGTAT ATCTGCCGGC TGGAAAATGG
TATGATTTCT ATAAAGGGAC AATGTATTAT GGAGGAGAAA CCTATAAGGC ATATGCACCT
ATTGACAGGA TACCTCTTTA TGTAAAAGAC GGCAGTATTA TTCTTACTAC AGAACCGGAA
GAAGATGTAA AAGATATTTA TGATAAATAT CAGTTGTTAA TCTATGGAGA GGGTTCAACA
ACAGAATACA TTTATGAAGA TGACGGAACA AGTTATGGTT ATGAAGATGG TAGTTATAAT
CTCATAAAAC TGGAGAAAAA AGATAACCAG TTAACAGTAA GCACCCTGCA GCATAAATAT
AAAGAAGAAA ATACAAACAG GGAATTAGAA ATTGTATATT ATAAAAACAA TAAAAAATAT
ACCAGGACAG TTGACTATAC CATTGGTGAG ACTATTAACA TATCTTTACA GGAAGGAAAA
GAAAGTAATA TACAAGTGGT TAATGTAGAA ATGGATGTTG ATGTCACCCA TTCAGAGTAT
AATGGTGACT TTTATGCCAA CTTATCTATT AAAAACAATT TAAATGAACC ACAGAATTTA
AGAATTAGAA TTGAAAAACC AGACCATTAT TATGTAAAAG CACAAATCGA TCTACCTGAA
TCCCTTGATT TCTCCAGTAA TGTTAAAGTG GAAGAGTCTG CAGAATATCT ATATCGTAAA
ATTCAGGTTG AAGATACTTA TACTTCAGTT TTCCCCTTTA AACCTTTTAA AGATAAAATG
CCTCAGCAAG AGAAGATTGA GGTAGCTATA GAAGATCAGA GGACAGGTAA GGTTCTGGAT
AAAAAGATAA TAACCCTGGG AAATGGTTAT TTGAAAAACT GGCGCTATGC TGTTTCCAAA
TATGAGGAGA TTGATAAGGA TGACTTAAAT TTTGCACCGG CCTTAGATTC AAACCCCTGG
GGTTATATTT ACCTGTATAA ATACCTGAAT ATGCAGGAAA ACGGTATAAA CCCTGTTGAT
TTTATAGAAA TTATCCAGAA AATTGGTTAT GGTTATGCCC GGGTAAATAT TCTGTCACCG
GAAAATAAAA AAGCTTACTT ACGTATCAGA GCAGATGAAG GGTCTACTTT CTATCTCAAT
GGAGAAAAAA TACATGAAAA TTCCCGATAT ACTATCGAAG AAGATATTTT AATTGAACTT
GAAAAAGGTG TAAATTTACT GGAAGCTAAT GTTCAGTGGA AATCTCCCCG TCCTTTTACT
GGAAGGGAAT TTGGTCTGTC AGCCCAGGTT CTTACCCTGG ACAAAGAGAT AGATGAGACT
GTCAAGAGTT TCTAA
|
|---|
| Protein sequence | MHLDNYNVVF NILEGEVLHI QIQDKNNKSP FLRVTGGEKV LKSIDYHQVD SREIIPVSER
YNLEINKDRE SFKIFDKTRQ KIVLESYDSF FRKVDEKQKG LSLSIKENEL FTGLGQDVEG
KLYIEDIERR CWNEWNGYDY LGSNSVPFYL SNQGYGLYLD TTYPSRFVFG KGEIQPKPIA
HEVMAETPFD WEEKACVNAE DQLTILGWEE EQLDFYILLG DMAEIEQKYY QLTGKPSLLP
KWSLGYIQCK NRYKSEEEIL HIARKMREKG IPCDVIVIDW LWFKEFGDLY WDGENYSEKM
AETIKKLKDM GIKILLAVHP FVDYSSKNYK ELSEKGCLSK VPEGGRPYFD HTNPATKEAM
WKFYQKLYDE GVAGWWTDMG EPESDLPGTQ GYAGKREVYH NVYTLLWSKN IMEAQRENTG
SRNFCLARTN ALGIQNYNTA YWTGDIFATW EIYRRNIKAL QTVSVSGQPY VCTDIGGFHT
DERFTPELYV RWLQWGVFAG LFRVHGVKPE NEPWSLGESN EKIIKKIIEF RYRFIPYIYE
KMYQMQQNGE AFIRPLIYDY PQDEKAIERE YQYLFGDILV CPVVEPDVRE IDVYLPAGKW
YDFYKGTMYY GGETYKAYAP IDRIPLYVKD GSIILTTEPE EDVKDIYDKY QLLIYGEGST
TEYIYEDDGT SYGYEDGSYN LIKLEKKDNQ LTVSTLQHKY KEENTNRELE IVYYKNNKKY
TRTVDYTIGE TINISLQEGK ESNIQVVNVE MDVDVTHSEY NGDFYANLSI KNNLNEPQNL
RIRIEKPDHY YVKAQIDLPE SLDFSSNVKV EESAEYLYRK IQVEDTYTSV FPFKPFKDKM
PQQEKIEVAI EDQRTGKVLD KKIITLGNGY LKNWRYAVSK YEEIDKDDLN FAPALDSNPW
GYIYLYKYLN MQENGINPVD FIEIIQKIGY GYARVNILSP ENKKAYLRIR ADEGSTFYLN
GEKIHENSRY TIEEDILIEL EKGVNLLEAN VQWKSPRPFT GREFGLSAQV LTLDKEIDET
VKSF
|
|---|
| |