Gene Hore_03400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03400 
Symbol 
ID7314728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp353925 
End bp354746 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content37% 
IMG OID643610765 
ProductKu family containing protein 
Protein accessionYP_002508096 
Protein GI220931188 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACTA TCTGGAAGGG TGCCATTAGT TTCGGACTTG TAAATATCCC CATTAAACTG 
GTTACGGCTA CCACCAAAAA GAATATCAGA TTCCGTTTTC TCCATAAAGA ATGTAAAACT
CCGGTCAGCA CTAAAAGGTT TTGTCCTACC TGCAAAAAAG AAGTGGAATA CGGGGATCTG
GTCAAAGGCT ATGAATATGA AGATAATAAA TTTGTTGTTT TAAAGGATGA AGATTTTGAT
AATATTCCGG TAAAGTCTAC CAAAACTATT GACATTGTTG ATTTTGTTAA ACTGGAAGAT
ATTGATCCTG TTTACTATAT AAAAACCTAT TATTTGAACC CGGCCGAAGG GGGAGAAAAA
CCTTATTTGT TATTAAAAAA AGCCATGGAT GATACCGGCA AAGTAGCCAT TAGTAAAATA
ACTATCAGAA AAAAAGAAAG TCTGGCCGTG ATCCGGGTTA TGGATGACGT TCTGGCTTTG
GAGACAATGT TTTTTGCTGA TGAAGTCAGG CCAGCTTCAG AGCTGGGACT TAATAATATT
GAAGAGAAGA TAAAAATAGG CAAAAAAGAG GAAGAACTGG CTGTTGAAAT TGTTAATAAC
CTTACTACCG AGTTTAAGCC GGAAAAATAC ACCAATGAAT ACCGGGAAGA ACTGATGAAC
ATAATTAGAC AGAAAATTGA AGGTAAAGAG GTCGAAACAC CGGATGTTGT TCCTGAAGAA
AGGAAGATTG TTGACCTTAT GGAAAAACTA AAGAAAAGTG TTGAGGCCAC CGAAGAGGGA
GAAGGAAAGA AAAAGAAGAA GACCAAGAAA AAGACCGGGT AG
 
Protein sequence
MRTIWKGAIS FGLVNIPIKL VTATTKKNIR FRFLHKECKT PVSTKRFCPT CKKEVEYGDL 
VKGYEYEDNK FVVLKDEDFD NIPVKSTKTI DIVDFVKLED IDPVYYIKTY YLNPAEGGEK
PYLLLKKAMD DTGKVAISKI TIRKKESLAV IRVMDDVLAL ETMFFADEVR PASELGLNNI
EEKIKIGKKE EELAVEIVNN LTTEFKPEKY TNEYREELMN IIRQKIEGKE VETPDVVPEE
RKIVDLMEKL KKSVEATEEG EGKKKKKTKK KTG