Gene Hore_03280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03280 
Symbol 
ID7314714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp337360 
End bp338010 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content37% 
IMG OID643610751 
Productputative transaldolase 
Protein accessionYP_002508084 
Protein GI220931176 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0309181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT TTATTGATAC TGCAAACTTA GAGGATATTA AAAGGGCAGC CAGTCTTGGA 
GTTATCGATG GAGTTACGAC AAATCCTACT CTGGTTTCTA AAGAGGGAAA TGTTGATTTT 
CATACCAGAA TTAAAGAAAT ATGTAATGTA GTTGAAGGTC CTGTTAGTGC TGAGGTTATT 
AGCCTGAATA CAGATGGTAT GGTCAAAGAA GCCAGGGAAT TATCCAAACT AGCCCCTAAT 
GTTGTTATAA AGATTCCTAT GACCATGGAT GGGTTAAAAG CTGTTAAAAT TCTAAGTAAG 
GAAGGGATTA AAACAAATGT AACTCTGGTG TTTTCAGCAA ATCAGGCATT ACTTGCTGCT 
AAAGCAGGGG GTACTTATGT TAGTCCCTTT ATGGGTCGCC TCGATGACAG GGCCCATGAA 
GGTATCAAAC TGGTTGAAGA AATTGCTACT ATATTTGAGA AATTTAATAT TAATACTGAA 
ATTATTGCTG CCAGTATCAG GAGCCCTTTA CATGTAAAAC AGGCTGCCCT GGCAGGAGCC 
CATATTGCAA CTATACCTTT CAATGTTATC GAAAAAATGT CCAAACATCC ATTAACAAAT 
ATTGGTATTG AGCGCTTTCT TAATGACTGG AAGAAAGTAC AGCAAGGATA G
 
Protein sequence
MKFFIDTANL EDIKRAASLG VIDGVTTNPT LVSKEGNVDF HTRIKEICNV VEGPVSAEVI 
SLNTDGMVKE ARELSKLAPN VVIKIPMTMD GLKAVKILSK EGIKTNVTLV FSANQALLAA 
KAGGTYVSPF MGRLDDRAHE GIKLVEEIAT IFEKFNINTE IIAASIRSPL HVKQAALAGA 
HIATIPFNVI EKMSKHPLTN IGIERFLNDW KKVQQG