Gene Hore_03080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03080 
Symbol 
ID7314694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp318139 
End bp319272 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID643610731 
Producthypothetical protein 
Protein accessionYP_002508064 
Protein GI220931156 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGGG TTTCTGTAAT CAAATGTGAT TCATATAAAG GGGTTGAAGA AAAGGTTGTG 
TCGGCTGTTA AATTGCTGGG TGGTATAGAG AAGTTTGTTA AACCCGGTCA GAAAGTGCTT
TTAAAGGTAA ACCTGCTTAT GGGAAAACCC CCGGATAAGG CTATTACTAC CCACCCCCGG
GTAGTAAAGG CAGTTGGTGA ATTGGTAAAA CAGGCAGGGG GACAGGTAAT AATCGGGGAT
AGCCCTGGAG GTCCCTTTAC TAAAAATGCC CTTAGAAAAA TATATAGGGT CACCGGTATG
GAGGAAGTGG CAGAGGAACT GGGAGCTGAA CTTAATTATG ATGTTGAACA GGAGAAGGTA
GAATACCGGT CTGGAATTAT AACAAAATCA TTTATAGTAG GTAAATATAT AACCGGGGCC
GATGTAATTA TCAATATACC GAAATTAAAG ACCCATGGTA TGACCATGTA TACCGGGGCT
GTTAAGAATT TGTATGGGGC TATTCCCGGT CTTCTCAAAG CTGATTACCA TTTGAGAATG
CCTGAACTGA GCCACTTCTC CCAGATGCTA ATAGACCTGG CTTTTTGTGT TAAACCAGCC
CTGAACATTA TGGATGGGAT AATCGGAATG GAAGGGGACG GTCCTTCGGG AGGGACACCT
CGTAAATTTG GTTATATTCT GGCCAGCGCT TCTCCCCTTG GCCTTGATGT AGCAGCTCTG
TTTTTAATGG GGGTCAGGCC ATTAAATAAA GTACCTCTAA TAAAGGCTGC CCGGGAACGT
GGAGAAGTAG CTGATATAAC CGATATTAAC CTTGTTGGTG ATAAGTTATA CCCACTGGAT
GATGTTGAAA TTCCCCAGGG GGACAGGGTA TCCAATCTAC TGGATAAAAG GCTACCAGGA
CCCCTTGCCA ATATATTAGG TTATTTACTC AGGCCCAGAC CTGTTTTTGA TCATGGTAGA
TGTACCGGAT GTCAGGTTTG TTTTAAGCAC TGCCCGGCTA AAACCATAGA AATGGTTGCC
GGAAAACCTG AAGTTAATTT AAATAACTGT ATCAGGTGCT TTTGCTGTCA GGAACTATGT
CCTTATAATG CTGTAGATAT TAAGCGACCT TTACTCGGCA GGTTAATTTT CTAA
 
Protein sequence
MERVSVIKCD SYKGVEEKVV SAVKLLGGIE KFVKPGQKVL LKVNLLMGKP PDKAITTHPR 
VVKAVGELVK QAGGQVIIGD SPGGPFTKNA LRKIYRVTGM EEVAEELGAE LNYDVEQEKV
EYRSGIITKS FIVGKYITGA DVIINIPKLK THGMTMYTGA VKNLYGAIPG LLKADYHLRM
PELSHFSQML IDLAFCVKPA LNIMDGIIGM EGDGPSGGTP RKFGYILASA SPLGLDVAAL
FLMGVRPLNK VPLIKAARER GEVADITDIN LVGDKLYPLD DVEIPQGDRV SNLLDKRLPG
PLANILGYLL RPRPVFDHGR CTGCQVCFKH CPAKTIEMVA GKPEVNLNNC IRCFCCQELC
PYNAVDIKRP LLGRLIF