| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02950 |
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| Symbol | |
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| ID | 7314681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 302577 |
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| End bp | 305210 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643610718 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002508051 |
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| Protein GI | 220931143 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
[COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGGCT TGATAGAAAC TATTAAGGAT AGGTGTCACG AGTGTTATGC CTGTGTCAGG
AATTGCCCAG TTAAGGCTGT CAGGGTAAAA AACAGACAGG CCGAGGTTAT CAGTGACCGG
TGTATTCATT GTGGTAATTG TGTCCTGGTA TGTTCCCAGG GAGCCAAGAA GGTCCGAGAT
TTTAAGGAAA TTGCTAAACA GTTCTTACAG GATAATGATA AAATAGTAGC CGGTCTGGCT
CCCAGTTTTC CTTCATATGG CAATCAACTT TCCCTTGATG ACTGGGTAAG TTATTTGAAG
TCACTGGGTT TTAACAGGGT TTATGAGGTG GCCTGGGGTG CAGAAATGGT TATTAAGGAA
TATAAAAAAA TATTAAAAAA GGCAACAGGT CCTGTGATTA GTTCGGCATG TCCGGTAATT
GTTAATCTAA TAAAAAAATA TTACCCCGAT CTCCTGACCT ACCTGGCAAC GATTGTTTCT
CCCATGAAAG CCCTGTACCG GTATATTAAA AAAATAGAAG GAAATGATGT GAAAGTAGTT
TTGATAGGTC CCTGTCTTGC TAAAAAAGGT GAGTTTGAAG GATATGAAGA TGTAGTAGTT
CTGACATTTA GTGAAATAGC TGAACCCGGT CAAAACAGTG GTGATTATCA AAAGATAATT
ACAGCTTCAA AGCAAGAGGT AACAGATCGC AGAAATACTG ATACCATCAA AAGAGAACCA
GATGATGAGA GCCGGGCTCT TCCCCTGGCC GGAGGATTAA TCCGGGCTAT TACTGGAAAA
TGTAATATAT TTCCAGAGGG TTATAATCAG GTTGAAGGTC GGGAGAAGGT AATTGATCTA
TTAAATAGTA TCAGGAATGG TGAAATAAAA CCTCGATTTG TTGATGCATT ATTTTGTGAG
GGTTGTATTA ACGGGGTTGA TTTGTATCAT GAAAATTACT TCAAAAAGGA AAAGGCGGTC
TTTAACTTTA TCAACCGGGC TAAAGATAAT AATGTTGCTC AGGCGAAGTA TTCTGAAACA
GTAGCTTCCA GAATCTCTTT AAAAGTTAAG TTTAAAGAAG ATTATAGGGA ACTTGCCAGC
CCGGGAGAAG AAGAAATCTG GAGTATATTA AATCAAACAA ATAAGTTTAC TGAAGAGGAT
TTACTGGACT GTGGAGCCTG TGGTTATGCA ACGTGCTGGG ATAAGGCTAT TGCCGTTTAT
CAGGGGCTGG CTGAAGTTGA AATGTGTTTA CCATACCTTA TTAATGAGAA GCGGTCTGAG
CTTAAAGAGA TTCAAATATT GAATAAAGAG ATGGATACAT TGATTAATTT CTCCTGTGAT
GGCCTGGTTA TGGTCAGTAA AGATGGCCGG ATAGAACGTG TTAATCATTC GTATCTGAAC
ATGGTAGGTT TTAAAAGGCA GGATTTAATC GGAAAGAGAG TTGAAGAGCT AGAAAAGGAG
AGATATATTT ATCCATCTGT TGCCAGTCTG GCCCTTAAGG AAAAACGGAA TATTACCCTG
GTTGAAAATA CCTCTGATAA AAAAAGACTT TTGGCAACAG CTAATCCGGT TTTTAATGAA
AATGGTGACC TGGAGTGGGT GGTGGTTAAT GTCAGAAATT TAGATTTAAT AAATGATGAA
AAGGATAAAG AAAAGGAAAA GTTAAAAAAA TATCTTGATA ATGCCCCTCA GCTGGATAAT
AACCCCGAGG GTAATACGGG CCATATAATT GTTAGTTCAG ATGAAATGAA AAATATATTA
ATGACCTGTC GTAAGATAGC TGGAACAGAT TCGACTGTTT TAATAACTGG AGAATCAGGG
GTTGGAAAAG AAGTTGTTGC CAGGTATATT CATGAACAGA GCCCGGGGAG GCAAGAATTT
GTAAAAATTA ACTGTGCTGC AATTCCCGAA AGCCTGCTCG AATCCGAACT GTTCGGGTAT
GAAACCGGTG CTTTCAGTGG AGCCAAAAGA GCGGGCAAAC CTGGTTTGAT TGAAAAAGCT
GACAGGGGAA CTCTCTTTCT GGATGAAATC GGTGAAATGC CCCTTAATAT GCAGGCAAAA
TTACTTCAGG TTCTTCAGGA ACGGAAACTT ACCAGGATAG GTGGGGTAAA ACCCGTGAAG
ATAGACTTTA GATTGATTGC AGCTACTAAT AGGGATTTAC GGCAAATGGT CAGGCAAAAA
TATTTCAGGC AAGATTTATT TTACCGCCTT AATGTTGTAC CTCTATATAT ACCCCCATTA
CGGAAAAGGC CTGAAGATAT TTTATCTCTT ATTAAATATT TTCTTGATCA ATATTGTGAA
AAATATAATA AACAGATTAA GCTAACCAGG GATGCGGAAG AACTACTGCT CAGTTATAGT
TGGCCCGGAA ATGTTCGTGA ATTAACTAAT CTGATAGAGA GGTTGGTGGT AACTTGCGAA
GAATCTTTTG TTGACCGTAA TATTATTATT GAATATATCG ATAATCCTGA GGTCAAGACA
CCGGAGATTT TAATAAATAA AATAATGCCC TTACCTGAGG CTGTTGCCAG AGTCGAAAAG
AAATTACTTT CCATGGCCAG GAGTAAAGGT AACTCCACTT ATGATATGGC TAAATTACTG
GGGGTTAATC AATCCACAGT TGTCAGGAAA TTACATAAAT ATTTTAAACA GTAA
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| Protein sequence | MVGLIETIKD RCHECYACVR NCPVKAVRVK NRQAEVISDR CIHCGNCVLV CSQGAKKVRD
FKEIAKQFLQ DNDKIVAGLA PSFPSYGNQL SLDDWVSYLK SLGFNRVYEV AWGAEMVIKE
YKKILKKATG PVISSACPVI VNLIKKYYPD LLTYLATIVS PMKALYRYIK KIEGNDVKVV
LIGPCLAKKG EFEGYEDVVV LTFSEIAEPG QNSGDYQKII TASKQEVTDR RNTDTIKREP
DDESRALPLA GGLIRAITGK CNIFPEGYNQ VEGREKVIDL LNSIRNGEIK PRFVDALFCE
GCINGVDLYH ENYFKKEKAV FNFINRAKDN NVAQAKYSET VASRISLKVK FKEDYRELAS
PGEEEIWSIL NQTNKFTEED LLDCGACGYA TCWDKAIAVY QGLAEVEMCL PYLINEKRSE
LKEIQILNKE MDTLINFSCD GLVMVSKDGR IERVNHSYLN MVGFKRQDLI GKRVEELEKE
RYIYPSVASL ALKEKRNITL VENTSDKKRL LATANPVFNE NGDLEWVVVN VRNLDLINDE
KDKEKEKLKK YLDNAPQLDN NPEGNTGHII VSSDEMKNIL MTCRKIAGTD STVLITGESG
VGKEVVARYI HEQSPGRQEF VKINCAAIPE SLLESELFGY ETGAFSGAKR AGKPGLIEKA
DRGTLFLDEI GEMPLNMQAK LLQVLQERKL TRIGGVKPVK IDFRLIAATN RDLRQMVRQK
YFRQDLFYRL NVVPLYIPPL RKRPEDILSL IKYFLDQYCE KYNKQIKLTR DAEELLLSYS
WPGNVRELTN LIERLVVTCE ESFVDRNIII EYIDNPEVKT PEILINKIMP LPEAVARVEK
KLLSMARSKG NSTYDMAKLL GVNQSTVVRK LHKYFKQ
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