Gene Hore_02670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02670 
Symbol 
ID7312587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp271978 
End bp273489 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content39% 
IMG OID643610690 
Productglycoside hydrolase family 16 
Protein accessionYP_002508023 
Protein GI220931115 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAA ATAAAATTGT ATCAGTGTTT TTATTATTAA TTATTAGTAC AGCTGGCGTT 
ATGGCAACAG ATGATAATGT AGGGCAAGAA AAACATCAAG TGCCCTATGA TCAATTGACA
TTAGTCTGGA GTGATGAATT TAATTATACA GGATTCCCCG ATCCTGATAA ATGGAGTTAT
GATGTAGGGG GGCATGGCTG GGGCAATGGA GAGAAACAGT ACTACACTGA AAAAAGAAAA
GAAAATGTCT GGGTAGAAGA TGGAAGATTA ATTATTATGG CCAGGAAAGA GGATTATAAG
GGTAATAAAT ATACATCAGC TAGATTAGTT ACCCGCAATA AAGGAGACTG GTTATATGGT
AGAATAGAAG TGAGGGCCAA ACTCCCCCGG GGAAGAGGAA CCTGGCCTGC TATCTGGATG
CTTCCTACTG GCTGGATATA TGGTAACTGG CCCAGCAGCG GGGAGATAGA TATAATGGAA
CATGTGGGTT ATGATATGGG GGTAGTTCAT GGTTCAGTAC ATACCAGGAG TTATAACCAT
CGACTGGGGA CCCATAAAAC TAATACCATC AGGGTTGAAG AGGTTGATAA AAAATTTCAT
GTTTATAGTA TTGAATGGTA TCCTGGTAAA ATACTTTTCT TTGTTGATAA TATCCATTAT
TTTACCTTTA GGAATGAGGG AACCGGCTGG CGGGAATGGC CCTTTGATCA GCCCTTCCAT
TTGATATTAA ATATTGCAGT AGGTGGTGCC TGGGGTGGTC AAAAAGGAAT TGATGACAGT
ATCTGGCCCC AGAGTATGGA GGTTGATTAT GTAAGGGGTT ATGATTTAAA TATTGAAGAA
AGGGATAAGA TCCCTCCCGG AAAACCTGGT AATTTAAAGG CAGATTCTAC TGCCATTTAT
GTAGATTTAA GCTGGGACCA TTCTGTTGAC AATTTTGGGG TAAAAGAATA TGAAATTTAT
TTAAATGATA GATTAATAGG AAAAACCAGT AATACCAAAT TTAAGGTTAA AAAACTGGAC
CCTGAAACAA AATATAATTT TAAGGTCAGG GCAGTAGATT TTGCAGGAAA TGTATCTGAG
TATAGTTCTG TTCAGGTTAA AACTACGTCC CTGCCTTTAA AAATAATTCC GGGAAAAGTG
GAAGCAGAGG AATACCTTAT AATGGAGGAT GGAATTGCCA CTGAAACTAC AACTGATGCT
GGTGGTGGTG TTAATCTTTG TTATATAGGT GATGGTGACT GGATGGAGTA TGTTCTGGAG
GTACAGGAAA CAGGAAATTA TCAAGTGGAT TTTAGAGTGG CCGGGGTAAT CAAGGGCAAA
GTAGAGCTCA GAGATGAAAA GGGGAACACC CTGGCCAGTG TCGAAGTTCC TGCTACTGGT
GACTGGCAAA AATGGGTTAC TGTTTCCAGT GATAAATTTA CCCTGGCAGC TGGAGTATAC
CATATTAAGG TTTATGCTAC AATTGGTGGC TTTAACCTTA ACTGGTTTGA GATTAAGAAA
GTTGACCAGT AG
 
Protein sequence
MLRNKIVSVF LLLIISTAGV MATDDNVGQE KHQVPYDQLT LVWSDEFNYT GFPDPDKWSY 
DVGGHGWGNG EKQYYTEKRK ENVWVEDGRL IIMARKEDYK GNKYTSARLV TRNKGDWLYG
RIEVRAKLPR GRGTWPAIWM LPTGWIYGNW PSSGEIDIME HVGYDMGVVH GSVHTRSYNH
RLGTHKTNTI RVEEVDKKFH VYSIEWYPGK ILFFVDNIHY FTFRNEGTGW REWPFDQPFH
LILNIAVGGA WGGQKGIDDS IWPQSMEVDY VRGYDLNIEE RDKIPPGKPG NLKADSTAIY
VDLSWDHSVD NFGVKEYEIY LNDRLIGKTS NTKFKVKKLD PETKYNFKVR AVDFAGNVSE
YSSVQVKTTS LPLKIIPGKV EAEEYLIMED GIATETTTDA GGGVNLCYIG DGDWMEYVLE
VQETGNYQVD FRVAGVIKGK VELRDEKGNT LASVEVPATG DWQKWVTVSS DKFTLAAGVY
HIKVYATIGG FNLNWFEIKK VDQ