Gene Hore_02660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02660 
Symbol 
ID7312586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp270932 
End bp271507 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content42% 
IMG OID643610689 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_002508022 
Protein GI220931114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATG GAAGCCGTCC CCCCTGTCAG GGAATCCTCT ATACAGTTAA ACCCGGTGAT 
ACATTATCAA AAATTGCTAG ACGATATAAC CTAACAGTAA GGGATATAGT AAGTGCAAAC 
CCGCAAATTA GTGATCCTGA TAAAATAACA GTTGGCCAGG TTATTTGTAT TCCAAAGGTA 
GCATCTCAAT TAAGAGAATG TGCTATAGTT CTGGCTTTGT CCCGGGAAGC TACTGTTGCT 
CTCCCTGAAA TAGCTGGAGG AGTTGTTTTG GTCCAGAGGG CTGGAGAAGG GAAATATGCC 
CTCACCTTTG CAGCTACAGG TTTACCCAAC CCCGGATCTT TAGGGGAATT TGATACTTAT 
CTAGGTTCAA TTAACATTAA CGGGCAAGAG TATTCAGCAG TATTGAGGGT TTCAGCACCT 
TTTGAGCAGG AACCAACCTG GGCTGGTACG AGGGTAATAA ATATAAATCC TTTTAATTAT 
CCTGACAGTA CCGTTACTAT TTTTCCCTTC AACCTTGAAA CAAGTATCAG GTCTGGACCT 
ATATTAGGAG GAACCATAGC TGAATGTAAA CGATAA
 
Protein sequence
MNHGSRPPCQ GILYTVKPGD TLSKIARRYN LTVRDIVSAN PQISDPDKIT VGQVICIPKV 
ASQLRECAIV LALSREATVA LPEIAGGVVL VQRAGEGKYA LTFAATGLPN PGSLGEFDTY 
LGSININGQE YSAVLRVSAP FEQEPTWAGT RVININPFNY PDSTVTIFPF NLETSIRSGP 
ILGGTIAECK R