| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02570 |
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| Symbol | |
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| ID | 7312577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 263081 |
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| End bp | 264334 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643610680 |
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| Product | ABC-type antimicrobial peptide transport system, permease component |
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| Protein accession | YP_002508013 |
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| Protein GI | 220931105 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000358315 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA TGGAAACAAT TAGACTGGCC CTGGCCGGGG TTGGAAGTAA TAAATTGAGG
TCATTTTTGA CCCTGTTAGG TATTATAATT GGAGTAACAG CAGTTATTCT GATGGTATCT
CTGGGGAGTG GAACCCAGAA GGTTGTTAGT GGCCAGTTCA GTAATCTTCA GACCCGTCAA
ATATATATAG ATGAAAACCA TAATTTACCA TACCATCTGC AGGGGCGGTT AAGTTTGCGG
GACAGGGATT ACCTTAAAGA CTCTGTAATG GGTGTTGAAA AGGTCGTTCC CTTTTACCAG
CTTTACACGG GGGTAAAGTA TGGTGATAAT GAGCAGGAAG GCTGGGTTTA TGGTATCGAT
CCTGCTTCAC AGGAACTGAT TAATGTAAAT ATAAGTTATG GCCGTTTTTT TGACCAGTCA
GATATTGATA ATAAAGAGCG GGTTGCTATA GTCGGGGAAC AGTTGCTGGA AAGACTGGCG
AGGACAGGAA ATATGGTGCA ACCACAACAC GCCTCTACCC CCGATTATGC CTCAGCAGTC
GGTAAATATA TATATCTGTC TGGTAAGAAA TTTATTATTG TTGGAGTTAT GCAGGAATCC
CAGAACATGA TGTTTATTTC TAATCAATCG GTTCTACTTC CATACACCAC TATCAGAGAC
CACTGGCGCC GGGAAACCAG ATATGTAGAT TTTTATCTGC TATCCTATGG TCCAGACGCT
TCAGAGAAAG ATACCCTGGA ACAGGTAAAA TATCTTATGG ATAGAAAATA CGGTAAAACC
AGTACCGGGA AGAGTAAGTT TTACTTCCAG AGTCTTCAGG AAAATGTCAA TATCATGACC
AGGGTTTTTA CTGTATTTAC TTATGTGCTT GGTGGAATTG CTTCTATTTC CCTGCTGGTA
GGCGGTATCG GGGTTATGAA TATTATGCTG GTTACCGTTA AAGAAAGGAC CCGTGAGATT
GGAGTAAGGC TGGCCATAGG AGCGACCAGG CAGGATGTTC AGAGACAGTT TTTAGCAGAA
TCAGTCATCC TCTCTGTCGG TGGTGGTATT GTCGGGGTTT TAATGGGTAG TATTCTTTCA
TTTCTTGCCA ATATGATCTT GAAACAGGTC TTCAACTGGT GGCAGGGATT TATTCCAGGG
TGGGTTATTC TGCTATCCTT CGGGGTAACT ACCGCCATTG GGGTTATATT TGGTTTTTAT
CCTGCCTATA AGGCCTCCAG GCTTGACCCC ATAGAGGCTC TAAGATATGA ATAG
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| Protein sequence | MNLMETIRLA LAGVGSNKLR SFLTLLGIII GVTAVILMVS LGSGTQKVVS GQFSNLQTRQ
IYIDENHNLP YHLQGRLSLR DRDYLKDSVM GVEKVVPFYQ LYTGVKYGDN EQEGWVYGID
PASQELINVN ISYGRFFDQS DIDNKERVAI VGEQLLERLA RTGNMVQPQH ASTPDYASAV
GKYIYLSGKK FIIVGVMQES QNMMFISNQS VLLPYTTIRD HWRRETRYVD FYLLSYGPDA
SEKDTLEQVK YLMDRKYGKT STGKSKFYFQ SLQENVNIMT RVFTVFTYVL GGIASISLLV
GGIGVMNIML VTVKERTREI GVRLAIGATR QDVQRQFLAE SVILSVGGGI VGVLMGSILS
FLANMILKQV FNWWQGFIPG WVILLSFGVT TAIGVIFGFY PAYKASRLDP IEALRYE
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