| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02540 |
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| Symbol | |
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| ID | 7312574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 259643 |
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| End bp | 261088 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643610677 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002508010 |
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| Protein GI | 220931102 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0229793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA AGATTATTAT TCTTATATTG ATAGTGGCTG TAATTGGCTC CAGTATTTAT
ATGATGAATA AAAAAGGTGG GAGCAAACAG GTTGCCGGGA ATGTAAAACT TGTCAAAACC
GTGGAGGCAA AGCCTGGTGA AATTATGACC AGGGTCCTGG CTGATGGTAA TGTTACTTTT
GAAAATGACA GGGATATTAA AGTCAAGGTC TCCGGCCTTG TTGAAAGGGT CTATATCGAG
GAAGGGGATG AGGTAGCAGA AGGTGAGAAG ATTATTAAAA TCGATGGAGA CCCTCTAAGG
GATAATCTTG AACTTGCCAG ATTAAGTTTA AAAGAGGCTT CAAAAAATTA CGAAACCCTT
GTTAGTAACT TTAAGAAGCA GGATAAAATA AATGAATTAA AGCTTAAAGA GGCCAGACAG
AATTTAGAAC TTGCCCGCTT ATCACTCAAT AAAGAAAAAG AGTCACTGGA ATATAAGCTT
AAGACCCTGC AGGATAAGAT TGATGATGCT AAGAAGGCCC TTGATGAGGC CCGCAAAGAA
TGGGAAAAGC AGAAATACCT TTTCCAGAAT AAGGCTGTTG CTGAAAAGGC TGTTAAAAAT
GCAGAAAAAG CTTACCAGAC AGCCCAGGAT AACTATGAAG ACCTCAAAGA AGAGCTCAAG
TATTTGGAGC AAAAAACCAT TCCGAGAACT ATTGAACTGG CCAATCTGGA AGTGGGAAAA
GCTGAAAACA GTCTGGAGCT TTTAAAGAAT TCTCTGGAAA AAAGTAATAT TACTGAAAAT
GACCTGGAAC TGGCCCGGAT AAAGATTGAC AGGGCAAAAA AGAATATAGC TGATATTAAG
GAAGATTTGA ACAGATTAGA AACCCTGGCC CCGATAACAG GGACCATTGT CTCTCTGGAA
ATCAGGGAAG GCGATAAAGT TGTAGAAGGA ACCACTGTCG GTAAAATTGC TGACCTTGAA
TCCTTACTTA TAGAAGTTAT GGTAGATGAA GTTGATGTCA ATGAAGTGGC GGTAGGACAG
AGTGTTACTC TAACCAGTGA TTCTTTTGAG GATAAGCTTA CAGGAGAGGT AATAAAAATA
GACCCGGTTG CCACCAAGGT AGGCAATCTA AATAAATACA GGACACAGAT AGTGGTTAGT
GACCCTGAAG GTGTTTTAAA ACCGGGTATG TTTGTTAATG CGGAAATCGT TACATCCTAC
AAAAATAATG TAATTACCCT GCCGCCCCTG GCAGTCCTGG GAGACGAAGA TAAATATGTA
TATGTTGTTG AGGATGGTAA AGCTGTAAAG AGGCCGGTGG AACTCGGTCT ACAAAACCTT
ACTAAAGTGG AAGTAAAAGG TGTTAAAGCC GGGGAACGGG TTATCATTGG ACCATTTACT
GTCCTTAAAG ATTTAGAACC CGGGACACCT GTGTCTGATG TTACTGAAAG AAAAAAAGAT
AAATAA
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| Protein sequence | MKKKIIILIL IVAVIGSSIY MMNKKGGSKQ VAGNVKLVKT VEAKPGEIMT RVLADGNVTF
ENDRDIKVKV SGLVERVYIE EGDEVAEGEK IIKIDGDPLR DNLELARLSL KEASKNYETL
VSNFKKQDKI NELKLKEARQ NLELARLSLN KEKESLEYKL KTLQDKIDDA KKALDEARKE
WEKQKYLFQN KAVAEKAVKN AEKAYQTAQD NYEDLKEELK YLEQKTIPRT IELANLEVGK
AENSLELLKN SLEKSNITEN DLELARIKID RAKKNIADIK EDLNRLETLA PITGTIVSLE
IREGDKVVEG TTVGKIADLE SLLIEVMVDE VDVNEVAVGQ SVTLTSDSFE DKLTGEVIKI
DPVATKVGNL NKYRTQIVVS DPEGVLKPGM FVNAEIVTSY KNNVITLPPL AVLGDEDKYV
YVVEDGKAVK RPVELGLQNL TKVEVKGVKA GERVIIGPFT VLKDLEPGTP VSDVTERKKD
K
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