Gene Hore_02380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02380 
Symbol 
ID7312558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp244126 
End bp245076 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID643610661 
ProductABC transporter related 
Protein accessionYP_002507994 
Protein GI220931086 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA TTATACTGGA AACAAAAAAC CTTTCTAAAA AATTTGGACA GAGATTGGCA 
GTCAACAGTG TAAATTTGAA GGTACATAAA GGTGATATCT TTGGCTTTCT GGGTCCAAAT
GGCGCTGGAA AAAGTACCAC TATTAGAATG ATTACCGGGC TGGTTACTCC TACCTCAGGC
CGGATTTTAT TCAATAACAC CCTTCTTGAT GGAAAAAAGC ACCTCTTTCT CCGTAGATAC
CTGGGTTCTC TGATAGAAAT ACCCAGATTT TATGAATACC TGACAGCCTA TGAAAACCTG
GAACTGATTA CTCAGATATC TGGTATAAAA GATAAATCAA CCATCGATAA AGCTTTAATT
CAGGTTGGTC TTTACAGCAG GCGAAATGAT CGAGTTCGTA CTTTTTCGCA GGGAATGAAA
CAGAGACTCG GTATTGCCCA GGCAATAATG GGCAAACCAA AACTGGTTAT CCTGGACGAG
CCAACCAATG GTCTCGACCC GGAGGGCATA AACCATATCC GACGACTGAT TTTAAACTTA
AACAAACAAA AAGGTATTAC CTTTATGATA TCAAGCCACA TTCTAAAGGA AATTGAAAGT
ATATGTAATC GGGTTGCCAT CCTCCAGGAA GGTAAAGTTT TGGCCCAGGG TCGGGTGGTT
GACCTCCTGA ATACTCCCCA GGAGATTCTA ACCCTGGAAG TTTCACCTGT ATTAAAGGCA
ATCAATCTCT TACACAGCCA CCCCGGGGTT ATTAAAGCAG TTCAGAACAA TAATCATCTA
AATCAGGTTA AAGTATTTAC CCGGGATTTA AAACCCGATC TCCTTAATCA ATATCTAGTA
AAAAACGGAA TAAAAGTAGC CTCATTACAG AAAAATAATA CAAGCCTTGA AGATTTCTTC
CTGACATTAA CCAGGAAAAA GGGGGAATTA AATTGCTGTG GCCAATATTA A
 
Protein sequence
MGKIILETKN LSKKFGQRLA VNSVNLKVHK GDIFGFLGPN GAGKSTTIRM ITGLVTPTSG 
RILFNNTLLD GKKHLFLRRY LGSLIEIPRF YEYLTAYENL ELITQISGIK DKSTIDKALI
QVGLYSRRND RVRTFSQGMK QRLGIAQAIM GKPKLVILDE PTNGLDPEGI NHIRRLILNL
NKQKGITFMI SSHILKEIES ICNRVAILQE GKVLAQGRVV DLLNTPQEIL TLEVSPVLKA
INLLHSHPGV IKAVQNNNHL NQVKVFTRDL KPDLLNQYLV KNGIKVASLQ KNNTSLEDFF
LTLTRKKGEL NCCGQY