Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_02300 |
Symbol | |
ID | 7312550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 236182 |
End bp | 238194 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643610653 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_002507986 |
Protein GI | 220931078 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000139643 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTA AAGTAGAACA GGAAATAAGG GATTTAAGGG AGAAGATACG GTATCATGAG TACCGGTATT ATGTTCTAGA TGACCCGGAA ATATCTGATG CTGAATTTGA TGAATTGATA CAGAGGCTTA TTGATCTGGA GGAAAAGCAC CCTGGCCTGG TGACCCCGGA TTCTCCTACT CAACGGGTCG GTGGAGAGCC TCTTGATAAA TTTGATAAAG TAGAGCACCG GGTTCCCATG CTGAGCCTTG GTAATGCATT TAATGAGGGT GATTTAACGA ATTTTGCCAG GCGGATTTAC CGGCTCCTTG ATACAGGCAA AATAGACTTC GTGGTGGAAC ATAAAATCGA TGGGTTATCA GCGATATTAA CCTATCAGGG TGGTAGGTTG ATCCGGGGAG CAACCCGCGG TAATGGAGTG GTGGGGGAAG ATGTTACCGC CAATATAAAG ACCATCCCTT CTGTACCCCT CAGGTTAAAA AAAGATGTTG ATATCGAAGT CCGGGGTGAG GTATATATAA AAAAAGATGA TTTTAGTAAA TTAAATGAAA GGAGATTGAA GAAGGGAGAA GAACCCTTTG CTAATCCCCG GAATGCAGCG GCAGGTTCAA TTAGACAGCT TGACCCCAGG CTGGCTGCCG CCCGTCCCCT GTCCTTTATT GCCTACGATG TAGTTGCCTA TGAAGGAGAA GGTTTACAGA CCCATGTCGG GGCCCTGGAA TTACTCCGGG AGCTTGGTTT TAAGGTGAAC TGGTATCGTA AATGTGATGA TATTACAGAG GTAGTAAATA TTTGTAAGGA CTGGGTGGAT AAAAGAGAAG AATTACCCTT TGAGATAGAT GGTATGGTTA TTAAGGTCAA TGAACTGGGT CTGAGAGAAC AGCTGGGAGC TACTGCCAAA AGCCCCCGCT GGGCCATTGC TTATAAATTC CCTGCCCAGC AGAAGACAAC TGTTGTTAAA GATATTATTA TTTCGGTAGG CCGGACCGGG GCCTTAACAC CGACAGCTGT CCTGGAGCCT GTTGAGGTTG ATGGTTCTAC AGTCAGCAGG GCAACTCTCC ATAATGAAGA TGAAATAAGG AGAAAAGATG TTAGAATAGG GGATCATGTC CTGGTTCAAA AAGCAGGTGA TGTCATCCCT GAAGTGGTTA AGGTTATAAA GAGTAAACGG GATGGCAGTG AACAGATATT TCACATGCCC GAAACCTGCC CTGCCTGTGG TGGGGAGGTT GTGAGGGAAG AAGGTGAAGC TGTTTTAAGG TGTGTTAATG TGACCGGGTG CCCTGCCCAG AGACGGGAAG GAATTCTTCA CTTTGTCTCC CGGAATGCCA TGAATATTGA TGGCGTGGGG CCAGCCCTGA TAGACCAGCT TTTAGAAAAA GGGTTGATAG AAGATTATGC TGATTTATAT TACCTTAAAA AAGAGGATTT GATTCCTCTG GAAAGAATGG GGGAAAAATC AGCTACTAAT GCCATTGAGG CTATCAGGGC CAGTAAGGAC AGGCCTCTCT TTAGAGTTAT TTTTGCCCTG GGGATCAGGC ATGTCGGTCT GGGGGTAGCC CGGGTTTTAA CTGAAAAATA CCGGTCATTG TCTGATTTAA TGAGGGCATC CGGGGAAGAA CTGGTGGCTA TTGATGAAAT TGGTCCTACT ATAGCCCGGA GTATTATTGA ATTTTTTAAG GAGCCCCATA ACCGGGAGGT TATTAATAAA TTAAAAGAAG CCGGGGTGAG ACTTGAGGAG AAGGAAAATG GAAAAGAAGA GCAGAATTTA TACCTGTCAG GAAAAACATT TGTCTTTACC GGTAAATTAG ATGGTTTTAC CCGGAGTGAA GCCAGAGATA AGGTTATAGC AGCAGGAGGA AAGGTTACTT CAAGTGTCAG CCGGAAAACC GACTATGTAG TGGTCGGAGA TAGTCCCGGT TCCAAATATG ATAAAGCCCG GGAGTTGGGG GTAACTATTT TAGATGAAGA TAAATTTAAA GAAGTGTTAA AAGCGGGGGA TAATAATGGT TAG
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Protein sequence | MASKVEQEIR DLREKIRYHE YRYYVLDDPE ISDAEFDELI QRLIDLEEKH PGLVTPDSPT QRVGGEPLDK FDKVEHRVPM LSLGNAFNEG DLTNFARRIY RLLDTGKIDF VVEHKIDGLS AILTYQGGRL IRGATRGNGV VGEDVTANIK TIPSVPLRLK KDVDIEVRGE VYIKKDDFSK LNERRLKKGE EPFANPRNAA AGSIRQLDPR LAAARPLSFI AYDVVAYEGE GLQTHVGALE LLRELGFKVN WYRKCDDITE VVNICKDWVD KREELPFEID GMVIKVNELG LREQLGATAK SPRWAIAYKF PAQQKTTVVK DIIISVGRTG ALTPTAVLEP VEVDGSTVSR ATLHNEDEIR RKDVRIGDHV LVQKAGDVIP EVVKVIKSKR DGSEQIFHMP ETCPACGGEV VREEGEAVLR CVNVTGCPAQ RREGILHFVS RNAMNIDGVG PALIDQLLEK GLIEDYADLY YLKKEDLIPL ERMGEKSATN AIEAIRASKD RPLFRVIFAL GIRHVGLGVA RVLTEKYRSL SDLMRASGEE LVAIDEIGPT IARSIIEFFK EPHNREVINK LKEAGVRLEE KENGKEEQNL YLSGKTFVFT GKLDGFTRSE ARDKVIAAGG KVTSSVSRKT DYVVVGDSPG SKYDKARELG VTILDEDKFK EVLKAGDNNG
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