Gene Hore_02160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02160 
Symbol 
ID7312535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp224237 
End bp224911 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content40% 
IMG OID643610638 
ProductHhH-GPD family protein 
Protein accessionYP_002507972 
Protein GI220931064 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000559772 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGGT GCCGGGGAGT ATTCAGTAAC ATAACATGGA AAGCAGGTCT TAACGAAATC 
TATCACAGGC TTTATAAAAA ATTCGGTCCC CAGCACTGGT GGCCCGCTGA CTCCCGGTTT 
GAAGTTATTA TCGGAGCAAT TTTGACTCAG GCAGTTAGCT GGCAAAATGT TGAAAAGGCT 
ATAGAAAATT TAAAAAAACA TAAGGTCTTA TATCCTGAAG AATTGTTACA TCTGGAAGAG 
GAAATACTGG CGAAGATGAT AAAACCGGCC GGTTATTATA ATATGAAGGC CAGAAAAATT 
AAAGCCTTTA TTAACTTTTT GTTTGAGGAC TACGGGGGAA GTCTTGATGA AATGTTTCAG 
GAACCCCTTT CAAAAATCAG GGATAAACTG CTTGAGGTTT ACGGCATAGG GCCTGAAACC 
GCTGATTCTA TATTATTGTA TGCTGGGGAG TTTCCTGTTT TTGTAATTGA TGCTTACACA 
AAGCGTATTT TTAGCCGGAT TGGTTATATA GAGGAAAACA TAGGTTACCA TACCTTGCAG 
AAAATGATTA TGGACAACCT GCCTGCCAGA ACCGGGATAT ACAATGAATA CCATGCTCTT 
TTAGTGGCCC TGGGAAAAGA AATATGTAAA AAGAATAACC CCCTGTGTGA AAAATGTCCC 
CTTAACAGGA AATAA
 
Protein sequence
MSGCRGVFSN ITWKAGLNEI YHRLYKKFGP QHWWPADSRF EVIIGAILTQ AVSWQNVEKA 
IENLKKHKVL YPEELLHLEE EILAKMIKPA GYYNMKARKI KAFINFLFED YGGSLDEMFQ 
EPLSKIRDKL LEVYGIGPET ADSILLYAGE FPVFVIDAYT KRIFSRIGYI EENIGYHTLQ 
KMIMDNLPAR TGIYNEYHAL LVALGKEICK KNNPLCEKCP LNRK