Gene Hore_01880 details

Gene Information

• Locus tag: Hore_01880
• ID: 7312507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 194098
• End bp: 194808
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643610611
• Product: DNA alkylation repair enzyme
• Protein accession: YP_002507945
• Protein GI: 220931037
• COG category: [L] Replication, recombination and repair
• COG ID: [COG4912] Predicted DNA alkylation repair enzyme

Plasmid Coverage information

• Num covering plasmid clones: 74
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTACA TTCAGATAAT CAAACAGGAA CTTTATAAAT ATCGGGAACC TGAAAAAGCA 
GATTTCCTTC CCGGATTTTT TAAATGTTAT CCTGGTGGGT ATGGTGAGGG TGATCAGTTC 
ATTGGAGTCA GGGTTCCCCA TCAGAGGAAA GTTGCTAAAA AATATTATAA ACAGATATCT 
TTAAAAGATG TAAGTAAACT TTTAAATGAC CCGGTCCATG AATATCGATT GACCGGTTTA 
TTTATTCTCA TAAATAAATA CCAGAAAGCA GATCAGAATA AAAAACAGGA GATAGTAGAC 
CTCTATTTAA ATCATCTTGA TGGTGTTAAT AACTGGGACC TGGTGGATTC ATCTGCTGAT 
AAAATACTTG GGGATTTTTT ATTTAACAGG GATAAAAGTC TTTTATATAA ACTGGCGAAG 
TCAGGTGAAC TGTGGAAACA AAGAATAGCT ATTATAGCAA CAAAGTATTT TATTAAAAAA 
AATCAATATA GACACACATT GGAAATAGCT AAATTATTGT TAAACCATGA CCATGATTTA 
ATTCACAAAG CAGTGGGCTG GATGCTTCGT GAGGTTGGTA AAAGGAATCA GGCGATAGAA 
ATAAATTTCC TTAAAAAACA TTATAAAAAA ATGCCGAGGA CCATGCTAAG ATATGCAATT 
GAAAAGTTTG AGCCCAAATT AAGGAAGAAG TTTCTGAACG GTCAGATCTG A 

 

Protein sequence

MNYIQIIKQE LYKYREPEKA DFLPGFFKCY PGGYGEGDQF IGVRVPHQRK VAKKYYKQIS 
LKDVSKLLND PVHEYRLTGL FILINKYQKA DQNKKQEIVD LYLNHLDGVN NWDLVDSSAD 
KILGDFLFNR DKSLLYKLAK SGELWKQRIA IIATKYFIKK NQYRHTLEIA KLLLNHDHDL 
IHKAVGWMLR EVGKRNQAIE INFLKKHYKK MPRTMLRYAI EKFEPKLRKK FLNGQI