Gene Hore_01600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01600 
Symbol 
ID7313288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp166560 
End bp167774 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content40% 
IMG OID643610583 
Productglycogen synthase 
Protein accessionYP_002507917 
Protein GI220931009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR02149] glycogen synthase, Corynebacterium family 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT TGAAAGTAAC CATGCTAACC AAGGAATACC CACCATATAT ATATGGTGGG 
GCCGGGGTCC ATGTTGATTA TTTAACAGGG GCTTTAAAAG ATATAATGAA TGTTGAAGTC
AGGTGTTTTG GTGATCAGGA GGGTAATAAA AAGGGGATAG ATGTAACCGG TTATCACCCC
TGGGAAGATT TAAGTGAGGG AAGTGACATT CGCTTCCGTA AGGTACTGGA TCCTTTTTCA
GTTGATCTGG CTATGGTAAA GGACCCAATA GATTCTCATC TGGTTCATGC CCATACCTGG
TATACTTTTA TGGCAGGTTT TCTGGCTAAA AAATTGTATA ATATACCCCT GGTAACTACA
ATACATAGTC TGGAACCTTT AAGGCCGTGG AAGGAAGAAC AGCTGGGTCG CGGGTACCAG
CTCAGTCTCT GGATGGAAAA AATGGGAATA GAGAATTCTG ATAAAGTGAT TGCTGTTTCC
GGTGAAATGA AAAAGGATAT CTTAAAATAT TATGATGTTG ATGAAGACAG GGTAGAGGTA
ATATACAATG GTATCGATCT AGACCAGTAC AGGTATACTG ATAGTGATAC ATATAGAAGG
AAATATGGTA TCGATCTTGA TAAACCATAT GTCTTATTTG TGGGTAGAAT AACCAGACAG
AAAGGGATTA TTCACCTGGT AAATGCCATT AAATATATAA ATGAGAACAC CCAGGTAGTT
TTATGTGCCG GTGCTCCTGA TACTGAAGAG ATAGAAAAAG AAATGACAGA AAAAGTTGCC
GCCATACAGG AAAAGAGGGA TGGAGTAATC TGGATAAATG AGATGGTCAG TAAAGAAGCT
GTTATCGAAT TTTATTCCAA TGCTGCTGTC TTTTGCTGTC CTTCTGTTTA CGAACCCTTT
GGTATTATTA ACCTGGAAGC CATGGCCTGC CAGACACCGG TTGTTGCTTC GGCGGTCGGT
GGGATAAAAG AAGTAGTTGT TGATGGAGAA ACAGGTTTTC TTGTAAATTA CGAACAGAAG
GATGAAAAAA CCGGTGAGCC CAAAAACCCT GAGGCCTTCT CTAAATCCCT GGCAGAGAAA
ATAAATATGG TTTTAGAAGA TGACAAACTT GCCAAAGAGA TGGGTAAAAA AGGACGAGAA
CGGGTAGAAA AATATTTTAG CTGGGAGAGT ATTGCCCGGC AGACAAAGAA ACTTTATGAA
AGTATTGTTC AGTAA
 
Protein sequence
MDNLKVTMLT KEYPPYIYGG AGVHVDYLTG ALKDIMNVEV RCFGDQEGNK KGIDVTGYHP 
WEDLSEGSDI RFRKVLDPFS VDLAMVKDPI DSHLVHAHTW YTFMAGFLAK KLYNIPLVTT
IHSLEPLRPW KEEQLGRGYQ LSLWMEKMGI ENSDKVIAVS GEMKKDILKY YDVDEDRVEV
IYNGIDLDQY RYTDSDTYRR KYGIDLDKPY VLFVGRITRQ KGIIHLVNAI KYINENTQVV
LCAGAPDTEE IEKEMTEKVA AIQEKRDGVI WINEMVSKEA VIEFYSNAAV FCCPSVYEPF
GIINLEAMAC QTPVVASAVG GIKEVVVDGE TGFLVNYEQK DEKTGEPKNP EAFSKSLAEK
INMVLEDDKL AKEMGKKGRE RVEKYFSWES IARQTKKLYE SIVQ