Gene Hore_01540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01540 
Symbol 
ID7313282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp157508 
End bp158497 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content39% 
IMG OID643610577 
ProductRadical SAM domain protein 
Protein accessionYP_002507911 
Protein GI220931003 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000382646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CCGGGTTCTA CATAAAGATG GATAATGATA AAGTACAATG TCTGCTATGC 
CCCCATACCT GTGAAATTCC TGTCGGAGAA AAGGGCCGTT GTAAGGTCAG GGTAAATGAA
AAGGGTGAAT TAATTCTAAA AAACTATGGA GTCATTACAT CTATGGCAAT TGACCCTGTT
GAAAAAAAAC CATTATACCA TTTCTATCCC GGAACCAGGA TCCTGTCACT GGGGACATAT
AGTTGTAATT TTACATGTAA ACACTGTCAG AACTGGCAGA TAAGCCAGGA AAAACCCGAA
GTTGTAACCA GCTATTCACC GAAAGAAGTG GCTGACCTTG CCCGGGATAA AAATGTAATC
GGGGTGGCCT ATACCTATTC AGAACCATCG ATCTGGTTTG AATATGTTCT CAAAACAAGC
CAGGTCGTCA AATCTAACGG GATGAAGAAT GTCCTGGTGA CCAATGGTTT TATAAATAAA
AAGCCGCTCA AGGAGCTTAT ACCCTATATA GATGGTATTA ATATTGACTT AAAGGCCTAT
AATCCTGATT TTTACCAACG TATCTGTGGT GGCAAGTTAA AACCTGTTCT GGAAAATATT
AAATATCTGC GGGATAAAGT CCATATTGAA ATCACAACCC TTTTAATTCC TGGATTGAAT
GATTCGACCG AGGAACTTGA GGATATGTTT CAGTGGCTCA ACAGTCTTGA TCCGGATATT
CCCTTACATA TAACAAGGTA TTTCCCCAGA TACAGGTTGA ATCTGCCCCC GACTTCTATA
GATGAATTAA AAGAAGCTTA TGACCTGGCT AAAAGATATT TAAATTATGT ATACCTCGGT
AATATTAACC TTGATCAGGG CCGGGATACT GTGTGTCCCC ACTGTGGTCA GGTTGTAATT
GAAAGGAATA TCAGAGTCAT AAATAGAATT AAAGATGGGA GATGTCCCTG GTGTGGTCAG
GAGATAAAAG GAGAGTTCAG GAATAAATAA
 
Protein sequence
MEKAGFYIKM DNDKVQCLLC PHTCEIPVGE KGRCKVRVNE KGELILKNYG VITSMAIDPV 
EKKPLYHFYP GTRILSLGTY SCNFTCKHCQ NWQISQEKPE VVTSYSPKEV ADLARDKNVI
GVAYTYSEPS IWFEYVLKTS QVVKSNGMKN VLVTNGFINK KPLKELIPYI DGINIDLKAY
NPDFYQRICG GKLKPVLENI KYLRDKVHIE ITTLLIPGLN DSTEELEDMF QWLNSLDPDI
PLHITRYFPR YRLNLPPTSI DELKEAYDLA KRYLNYVYLG NINLDQGRDT VCPHCGQVVI
ERNIRVINRI KDGRCPWCGQ EIKGEFRNK