Gene Hore_01480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01480 
Symbol 
ID7313275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp152324 
End bp153175 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content39% 
IMG OID643610570 
ProductABC transporter related 
Protein accessionYP_002507904 
Protein GI220930996 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000123426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCC AGCTTAAAGA TGTTTCTCAC ATTTACAGTG GACAAAATGA AAAAGCACTT 
GAGTCTGTAA ATCTCAGGAT TCAAAGTAAT GAATTTATCG GGATTGTTGG GCATACCGGC
TCCGGCAAGT CCACCCTTGT TCAGTTATTT AATGGATTGA TTAAACCGAG TGAAGGCAAG
GTTTTTATAG AGGGGATAGA TATACACCAG AAAAAGGTCA GTAAAAGAGA AATCAGACAG
AAAATAGGAC TGGTTTTTCA GTATCCTGAA CATCAACTCT TTGAAGAAAC GATATATGAT
GAAGTGGCCT TTGGTCCCCG TAATTTAGAC CTTTCTGAAG AAGAAATTAA AAAAAGGGTT
ATTCAAGCTT TATCACTGGT AGGTATGGAT TATGAAACAT ATAAAGATAG GTCCCCTTTC
CATTTAAGCG GTGGTCAGCA ACGGAAAATA GCTATTGCTG GTGTTCTGGC CATGATGCCA
GAAGTTTTGA TTTTAGATGA GCCAACCGCG GGCCTTGACC CCAGGGGCAG GGAACAGCTT
ATAAAATTGC TGAAACAGTT GCATCGGGAT TATAAAATGA CAGTTATCCT CATATCACAT
CGGATGGAGG AAATTTCACA GTTATCTAAC CGGGTGTTGG TATTAAGCCG TGGTAGAATT
GTAATGGATG GTAAACCTGA AGAGGTATTT ACCCGGGTTG ATGAAATCAG AAAGCTCGGA
TTAGACCTCC CACAGATAAC GGAAGTTTTA TGGGAATTAA AAAACAGAGG GTTACGGGTT
AGAACAGATA TTTTTAATGT TGAAGAAGCA ACCCGGGAAA TAATTACAAA AATGAGGGAA
AGCCAATGTT AA
 
Protein sequence
MLIQLKDVSH IYSGQNEKAL ESVNLRIQSN EFIGIVGHTG SGKSTLVQLF NGLIKPSEGK 
VFIEGIDIHQ KKVSKREIRQ KIGLVFQYPE HQLFEETIYD EVAFGPRNLD LSEEEIKKRV
IQALSLVGMD YETYKDRSPF HLSGGQQRKI AIAGVLAMMP EVLILDEPTA GLDPRGREQL
IKLLKQLHRD YKMTVILISH RMEEISQLSN RVLVLSRGRI VMDGKPEEVF TRVDEIRKLG
LDLPQITEVL WELKNRGLRV RTDIFNVEEA TREIITKMRE SQC