| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_01450 |
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| Symbol | |
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| ID | 7313272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 150187 |
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| End bp | 151131 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643610567 |
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| Product | DNA-directed RNA polymerase, alpha subunit |
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| Protein accession | YP_002507901 |
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| Protein GI | 220930993 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000776333 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAGA TTGAGAAACC GAAAATCGAA AAGGTTGAGT GTACTGATAA TTATGGAAAA
TTTGAGGTTG CTCCCCTGGA AAGAGGGTAT GGGATAACCC TGGGAAATTC ACTACGGAGA
GTTCTTTTAT CCTCTTTGCC GGGAGCAGCC ATAACTTCTG TTAAGATTGA AGGTGTCAGG
CACGAATTTA GCACCATTCC CGGTGTTGTT GAAGATGTTT CCGAGGTTAT ACTGAATTTA
AAAGGGGTTG TCTTAAAATA TAAAGGTGAA GATATTGAAA AGATAACTCT TAACTGTGAA
GGAGAAGGGG AAGTAACTGC CGGGGATTTC AAAACTTCTG GTGACATAGA GGTTATAAAT
CCAGACCATC ATATTGCTAC TCTGGCCGAG GGTGGAAAGT TGCAGTTGGA AGCTACTGTT
GAGTTCGGTA GAGGTTATGT GACTGCTGAA GAGAATAAGG AACATTTTGA CCGTGTTATT
GGTTTAATTC CGATTGACTC CTCTTTTAGC CCCATAGAAA GGGCTAATTT TAAGGTTGAG
AATACCAGGG TAGGCCAGGT TACTGACTAT GACAGGCTTG TCCTTGAGGT CTATACAAAT
GGGAGTATAT CCCCTGAAGA CGCTATAAGT TTAGCGGCCA AGATTATGGT TGAACATCTG
GAATTATTCT TGAACCTGAC CGACGAAGTA ACCGATGTTG AGATTATGGT AGAAAAAGAA
GAAGAAGAAA AAGATAAAAT TCTCGATACA ACTATTGAAG AACTGGATCT CTCTGTCCGT
TCTTCAAACT GTTTAAAACG TGCTGGAATT AATACAGTTG GTGAATTAAT TAATAAGACT
GAAGATGATT TAATGAAGGT ACGTAACCTC GGTAAAAAAT CGTTACAGGA GATAAAAGAG
AAATTAAACG AACTGGATTT GAAACTTAAA GAACCTGAAA TTTAA
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| Protein sequence | MIEIEKPKIE KVECTDNYGK FEVAPLERGY GITLGNSLRR VLLSSLPGAA ITSVKIEGVR
HEFSTIPGVV EDVSEVILNL KGVVLKYKGE DIEKITLNCE GEGEVTAGDF KTSGDIEVIN
PDHHIATLAE GGKLQLEATV EFGRGYVTAE ENKEHFDRVI GLIPIDSSFS PIERANFKVE
NTRVGQVTDY DRLVLEVYTN GSISPEDAIS LAAKIMVEHL ELFLNLTDEV TDVEIMVEKE
EEEKDKILDT TIEELDLSVR SSNCLKRAGI NTVGELINKT EDDLMKVRNL GKKSLQEIKE
KLNELDLKLK EPEI
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