Gene Hore_01320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01320 
Symbol 
ID7313259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp143344 
End bp143883 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID643610554 
Productribosomal protein L6 
Protein accessionYP_002507888 
Protein GI220930980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.299584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACGTA TTGGTAAATT ACCCGTAGAT ATTCCAGAAA AAGTTGATGT ATCTGTTAAT 
GATAATCTGG TTACGGTAAA GGGCCCTAAA GGGGAACTTA CTAAAGAGTT TAATAATAAA
AAAGTAACAG TTGAGGTTAA AGACGGACAG GTGCTGGTAA GACGGGTACA TGATAAGGAT
AAGGATGCCC GTGCTTTCCA GGGTCTTACC AGAAGTTTAA TCGACAGTAT GGTAGAAGGG
GTTACCAACG GTTTTGAGAA AAAGCTTGAA ATGGTCGGGG TTGGTTATAA TGCCAAAAAG
AAGGGTAAAG ACCTGGAGCT GGAAGTTGGA TACTCCCATC CGGTGATAAT CGAGGCCGAA
GATGGTATTG AATTTGATGT TGAAAAAAAT AATAAAATAG TTGTCAGGGG TATTGATAAA
CAGCAGGTAG GTGAAATGGC AGCAAAAGTC AGGGCTGTCA GGAAGCCTGA ACCTTATAAA
GGTAAAGGGA TACGGTATGA AGGAGAACAC ATCAGACGCA AGGAAGGTAA AACTGGTTAA
 
Protein sequence
MSRIGKLPVD IPEKVDVSVN DNLVTVKGPK GELTKEFNNK KVTVEVKDGQ VLVRRVHDKD 
KDARAFQGLT RSLIDSMVEG VTNGFEKKLE MVGVGYNAKK KGKDLELEVG YSHPVIIEAE
DGIEFDVEKN NKIVVRGIDK QQVGEMAAKV RAVRKPEPYK GKGIRYEGEH IRRKEGKTG