Gene Hore_01230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01230 
Symbol 
ID7313250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp139807 
End bp140451 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content42% 
IMG OID643610545 
Productribosomal protein S3 
Protein accessionYP_002507879 
Protein GI220930971 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01008] ribosomal protein S3, eukaryotic/archaeal type
[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.845852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTCAAA AAGTCCATCC ACATGGTCTT CGAGTCGGTG TAATCAAAGA CTGGGATGCC 
AAGTGGTATG CCGATAAAAA TAACTATGCT GATCTTCTTC AGGAAGACTT AAAGATTAGA
AACCACGTTA AAAATAAAAT GTATGATGCC GGGATTTCAA GAATTGTAAT TGAAAGGGTT
GCTAACCGCT TAAAACTTGA TGTTTATACT GCCCGTCCCG GTATGGTTAT TGGTCGGGGT
GGATCTGAAG TTGATGCTCT GAGGAAAGAC ATAGAGCAAA TGACCGGAAA AAATGTTCAG
ATAAATGTAG TCGAAGTTGA AGATCCTGAA CTTGATGCCC AGCTCGTTGC TGAAAATATT
GCAGCCCAGC TGGAGAGAAG GATATCCTTT AGAAGGGCTA TGAAACAGGC CATGAATCGT
GCTATGCGTA TGGGTGCTGA AGGTTTTAAA GTACAGAGCA GTGGGCGTTT AGGTGGTGCC
GAAATGGCCA GAACTGAAGG ATATAGTGAC GGTCGGGTAC CACTGCATAC TTTAAGGGCC
GATATTGATT ATGGTTTTGC TGAAGCCTAT ACCACTTATG GTAAAATTGG TGTAAAAGTA
TGGATTAATA AGGGAGAAGT ATTACCCGAA GTTGAAGATA AGTAG
 
Protein sequence
MGQKVHPHGL RVGVIKDWDA KWYADKNNYA DLLQEDLKIR NHVKNKMYDA GISRIVIERV 
ANRLKLDVYT ARPGMVIGRG GSEVDALRKD IEQMTGKNVQ INVVEVEDPE LDAQLVAENI
AAQLERRISF RRAMKQAMNR AMRMGAEGFK VQSSGRLGGA EMARTEGYSD GRVPLHTLRA
DIDYGFAEAY TTYGKIGVKV WINKGEVLPE VEDK