Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_01230 |
Symbol | |
ID | 7313250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 139807 |
End bp | 140451 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643610545 |
Product | ribosomal protein S3 |
Protein accession | YP_002507879 |
Protein GI | 220930971 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.845852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTCAAA AAGTCCATCC ACATGGTCTT CGAGTCGGTG TAATCAAAGA CTGGGATGCC AAGTGGTATG CCGATAAAAA TAACTATGCT GATCTTCTTC AGGAAGACTT AAAGATTAGA AACCACGTTA AAAATAAAAT GTATGATGCC GGGATTTCAA GAATTGTAAT TGAAAGGGTT GCTAACCGCT TAAAACTTGA TGTTTATACT GCCCGTCCCG GTATGGTTAT TGGTCGGGGT GGATCTGAAG TTGATGCTCT GAGGAAAGAC ATAGAGCAAA TGACCGGAAA AAATGTTCAG ATAAATGTAG TCGAAGTTGA AGATCCTGAA CTTGATGCCC AGCTCGTTGC TGAAAATATT GCAGCCCAGC TGGAGAGAAG GATATCCTTT AGAAGGGCTA TGAAACAGGC CATGAATCGT GCTATGCGTA TGGGTGCTGA AGGTTTTAAA GTACAGAGCA GTGGGCGTTT AGGTGGTGCC GAAATGGCCA GAACTGAAGG ATATAGTGAC GGTCGGGTAC CACTGCATAC TTTAAGGGCC GATATTGATT ATGGTTTTGC TGAAGCCTAT ACCACTTATG GTAAAATTGG TGTAAAAGTA TGGATTAATA AGGGAGAAGT ATTACCCGAA GTTGAAGATA AGTAG
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Protein sequence | MGQKVHPHGL RVGVIKDWDA KWYADKNNYA DLLQEDLKIR NHVKNKMYDA GISRIVIERV ANRLKLDVYT ARPGMVIGRG GSEVDALRKD IEQMTGKNVQ INVVEVEDPE LDAQLVAENI AAQLERRISF RRAMKQAMNR AMRMGAEGFK VQSSGRLGGA EMARTEGYSD GRVPLHTLRA DIDYGFAEAY TTYGKIGVKV WINKGEVLPE VEDK
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