Gene Hore_01010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01010 
Symbol 
ID7314323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp119180 
End bp120373 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content45% 
IMG OID643610523 
Productelongation factor Tu 
Protein accessionYP_002507857 
Protein GI220930949 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000907786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AAAAATTTGA AAGGACAAAA CCGCATGTTA ATATTGGAAC CATAGGTCAC 
GTAGACCACG GTAAGACTAC TTTAACAGCA GCGATAACAG CTGTATTATC AAATCTGGGT
AGTGCTGAAG TAATGCCCTT TGATTCTATC GATAATGCAC CTGAAGAAAA AGAAAGAGGA
ATAACCATTG CTACCTCTCA CGTTGAATAT GAGACTGCTA ATAGGCACTA TGCCCACGTT
GACTGTCCAG GTCATGCTGA CTATGTAAAG AATATGATTA CCGGGGCCGC CCAGATGGAC
GGAGCTATTC TGGTAGTATC AGCAGCAGAC GGACCGATGC CCCAGACCAG AGAACATATT
CTTCTGGCCC GTCAGGTAGG TGTACCGAGC ATAGTTGTCT TTTTAAACAA GGCCGATATG
GTAGATGACG AAGAGTTAAT TGAGCTGGTA GAGATGGAAG TAAGGGAATT ATTAAATGAA
TATGAATTCC CTGGAGATGA CGTACCGGTA ATAGTTGGAT CAGCATTACA GGCTCTTGAA
AATCCTGATC CTGAAGGAGA ATGGGGTAAG AAGATCATTG AACTTATGGA AGCAGTAGAT
GAATACATTC CCGAACCAGA AAGGGATAAA GACAAACCAT TCTTGATGCC AGTAGAAGAC
GTATTCAGTA TTACCGGACG TGGAACAGTA GCTACCGGTA GGGTAGAGAG AGGAACCTTA
CATCCCGGTG ACGAGGTAGA AATTATCGGG ATTAAAGAGA CCCAGGAGAC CGTAGTAACC
GGGGTAGAGA TGTTCCGTAA GTTACTGGAT GAAGCGGTAG CAGGAGATAA CATTGGAGCC
CTGTTAAGGG GTATAGGAAG AGATGAGATA GAAAGGGGTC AGGTATTAGC CAAGCCAGGG
AGTATAACCC CACATACCCA CTTCAAGGCT GAGGTATATG TTCTGACCAA AGAAGAAGGA
GGAAGGCATA CTCCATTTTT TGAAGGATAC AGGCCCCAGT TTTATTTCAG GACCACAGAC
GTAACCGGGA CTATCAGCTT ACCAGAGGGA GTAGAGATGG TAATGCCCGG TGACAATGTA
GAGATGGAAG TAAAATTAAT TACTCCCATT GCTATGGAAG AAGGATTAAG GTTTGCTATC
CGTGAAGGTG GCCGTACCGT TGGTGCCGGT GTTGTCAGCC AGATTATTGA GTAA
 
Protein sequence
MAKEKFERTK PHVNIGTIGH VDHGKTTLTA AITAVLSNLG SAEVMPFDSI DNAPEEKERG 
ITIATSHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPS IVVFLNKADM VDDEELIELV EMEVRELLNE YEFPGDDVPV IVGSALQALE
NPDPEGEWGK KIIELMEAVD EYIPEPERDK DKPFLMPVED VFSITGRGTV ATGRVERGTL
HPGDEVEIIG IKETQETVVT GVEMFRKLLD EAVAGDNIGA LLRGIGRDEI ERGQVLAKPG
SITPHTHFKA EVYVLTKEEG GRHTPFFEGY RPQFYFRTTD VTGTISLPEG VEMVMPGDNV
EMEVKLITPI AMEEGLRFAI REGGRTVGAG VVSQIIE