Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00880 |
Symbol | |
ID | 7314310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 106731 |
End bp | 108086 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643610510 |
Product | DNA repair protein RadA |
Protein accession | YP_002507844 |
Protein GI | 220930936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000121912 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGAC CTAAAACCTA TTATATCTGC AGTGAATGTG GTTATAAATC TGCTAAATGG ATGGGACGTT GTCTAAACTG TGGTGCCTGG AATACTTTTC AGGAACTGGA TGAAGAAGCC ATTGAGGAAA AGGTGGATAT CAAGGTTACC CCTAGTTCAA TAACTGATAT AAAAGCCGGG GCCTGTCCCC GGCTTTCTTC CGGTATTGGG GAGTTTGACA GGGTGCTTGG TGGAGGTGTT GTGCCCGGTT CTTTAATTCT ACTTGGAGGT GCCCCTGGAA TAGGTAAATC GACCCTGGTT CTTCAAATGG CCAGGCACTT CAGCGAAAAA TATGGAAAAG TTTTATATGT CAGTGGTGAA GAATCAGCTT CCCAGTTAAA AATGAGGGCC GGGAGGCTCG GGGCTATAAA TGAGGATTTA TATGTTCTTT CTGAAACTAA TTTTCAACAA ATTTATGGTG TTATACAAAA TGAAAAATAT GAATTAATAA TAATAGATTC TATACAAACA ATATTTGACC CCCGGATTGA ATCTACCCCC GGTAGTATAA GCCAGGTTAA GGAAGTTACT AATAGGTTAC TTATTCAGGC CAAGAAACTG GAAGTTCCCA TCGTTTTAAT AGGACATGTT ACCAAGGAAG GACATCTGGC CGGTCCCCGG GTCCTGGAAC ATTTGGTTGA TACAGTTCTT CAGTTTGAAG GGGACAGGAA TTACATCTAT CGAATTCTCA GGGCAGTAAA AAATCGTTTT GGCTCTACAA ATGAGATAGG TGTCTTTGAA ATGATGGGAA GTGGTATGAG AGAAGTGGTT AATCCCTCGG AAATTTTCCT TAAAGGGAGG GCCCAGGGGG TATCGGGTTC TGTGATAGTT CCGGTTGTCG AGGGGAGTAG ACCCCTTCTT GTTGAGGTTC AGGCCCTGGT AACCTACTCG AGTTTTGGGA CCCCCCAGCG GTTAACAACC GGTGTTGACC GGAAGAGGGT TTCTATTTTA CTGGCTGTCC TGGAGAAAAA GGCTGGTATT AATTTTCATA ATCAGGATGT TAATATTAAT ATAACAGGGG GCTTAAAAGT AGAAGAGCCG GCCCTGGATC TCGGTATAAT AACAGCTATT TTATCAAGTT GTAAAGACCA GGAGGTAGCT CCGGACCTGG CTGTGATTGG AGAAGTAGGA CTGGCCGGGG AGATACGGGC TGTCAGTCAG ATAGAGAGGC GTTTAAGTGA ATTAAAAAAG ATGGGCTTTA AGGAAGTTGT TATTCCTGGA GGCAATATAT CTGGTCTGGA CTTTGACCCG GATATTAATA TAGTTGAAGT TAAAAATGTT AATGATCTCA TGAAGATATT GTTTAACAGG AGGTGA
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Protein sequence | MPRPKTYYIC SECGYKSAKW MGRCLNCGAW NTFQELDEEA IEEKVDIKVT PSSITDIKAG ACPRLSSGIG EFDRVLGGGV VPGSLILLGG APGIGKSTLV LQMARHFSEK YGKVLYVSGE ESASQLKMRA GRLGAINEDL YVLSETNFQQ IYGVIQNEKY ELIIIDSIQT IFDPRIESTP GSISQVKEVT NRLLIQAKKL EVPIVLIGHV TKEGHLAGPR VLEHLVDTVL QFEGDRNYIY RILRAVKNRF GSTNEIGVFE MMGSGMREVV NPSEIFLKGR AQGVSGSVIV PVVEGSRPLL VEVQALVTYS SFGTPQRLTT GVDRKRVSIL LAVLEKKAGI NFHNQDVNIN ITGGLKVEEP ALDLGIITAI LSSCKDQEVA PDLAVIGEVG LAGEIRAVSQ IERRLSELKK MGFKEVVIPG GNISGLDFDP DINIVEVKNV NDLMKILFNR R
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