Gene Hore_00730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00730 
Symbol 
ID7314291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp85052 
End bp86140 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content44% 
IMG OID643610491 
ProductShikimate/quinate 5-dehydrogenase 
Protein accessionYP_002507829 
Protein GI220930921 
COG category[R] General function prediction only 
COG ID[COG5322] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00000000274075 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT TTGCTTTTAT AATTCACCCC CTTGAACTGG ATGATGTTGC CCGGAAGTTT 
AGCTGGGCTT CTAAAGTTCC CGATTACATA GTTGAGAAAT TTGTCAGGAC TTTACCGGCC 
ATTAAGGCTT CTCATATAAC CGGTATCAGG TCAAAAACAG GCAAAGAGGT GGAAGGGTAT 
TTTGTTGTCT GCCCCTTGAC ATCTGAACAA ATGCTTAAAT TACCGGCAGA TAAGGTTATT 
AAAAAGATAA TTAAAGCCGG CAAAAAAGCC GAGAAACTGG GTGCCCAGAT TATTGGTCTC 
GGGGCTTTCA CATCAGTGGT TGGTGATAAA GGAATTACAG TTGCAAAGGC CCTGGATGTT 
CCGGTTACTA CTGGTAACAG CTATACTGTA GCTACTGCCA TAGAAGGCAC CAAGCTTGCG 
GCCCGCAAAA TGGGACATGA TATTAAAAAG GCGAGAGTTA CTGTGGTAGG AGCCACCGGT 
TCCATCGGCA GGGCTGTAAG TTTAATACTG GGGGAGGATA TTAAACACCT GAGCCTGGTA 
GCCCGGGATG AGAAGAAATT GTCAGCCCTC CAGGAAGAAG TACTGGAAGT AAATCCTGAA 
TTAGATGTCT CCTATTCAAC AGATGTATCA GAAGCTGTCA GGGAGTCCCA GATTGTTATC 
AGTGCTTCCG GTGCCGTTAA GGCCTTAATA GATGCTGATG ATTTACAACC GGGAACAGTA 
GTATGTGATG TAGCCCGTCC CCGTGATGTA GCTGAAAGGG TAGGACGGGA ACGGGACGAT 
GTTCTAGTAA TTGAGGGTGG AATTGTTGAA GTTCCGGGAC CCGTTAACTT TAATTTTAAT 
TTTGGTTATC CTCCTAAAAC TTCATATGCC TGTATGGCTG AAACCATGAT TTTGACCCTG 
GAAGAGAGAT TTGAAAACTA TAGCCTCGGG CCTGTTCTGG AACTGAAAAA GGTTAAAGAA 
TCACTTAAAC TGGCTAAAAA ACATGGTTTC AAACTGGCTG GATTGAGGAG TTTTGAACGG 
CCACTTTCTG AAAAGCAAAT TGCTTTAATA AGGGAGAACG CGGAGGAGAA AATGAGTGCA 
GTATTTTAG
 
Protein sequence
MNKFAFIIHP LELDDVARKF SWASKVPDYI VEKFVRTLPA IKASHITGIR SKTGKEVEGY 
FVVCPLTSEQ MLKLPADKVI KKIIKAGKKA EKLGAQIIGL GAFTSVVGDK GITVAKALDV 
PVTTGNSYTV ATAIEGTKLA ARKMGHDIKK ARVTVVGATG SIGRAVSLIL GEDIKHLSLV 
ARDEKKLSAL QEEVLEVNPE LDVSYSTDVS EAVRESQIVI SASGAVKALI DADDLQPGTV 
VCDVARPRDV AERVGRERDD VLVIEGGIVE VPGPVNFNFN FGYPPKTSYA CMAETMILTL 
EERFENYSLG PVLELKKVKE SLKLAKKHGF KLAGLRSFER PLSEKQIALI RENAEEKMSA 
VF