| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00700 |
|---|
| Symbol | |
|---|
| ID | 7314288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 81799 |
|---|
| End bp | 83241 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643610488 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-- lysine ligase |
|---|
| Protein accession | YP_002507826 |
|---|
| Protein GI | 220930918 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATGG AAAGAAAGGA AGACCTCCCT GCCTTTACAG ATATAACCTG TGATTCAAGA
GAAGTAAAAC CGGGATATGC TTTTGTAGCC ATAACGGGGT TCAAAAATGA TGGACATAAT
TTTATTGAAG AAGCTATTAA TAAAGGGGCC AGTGTCATAT TCACGGAAAA GGAAATAAAA
TCCCGGAGTG GTATTCCCAT CGTCCGGGTT AAAGATAGTC GCTCTATACT GGGAAAGCTG
GCAGCTGAAT TTTATAATTA CCCATCCCGC AAATTAAAAC TGATAGGTGT TACCGGAACA
AACGGGAAAA CAACAACCAC CCACCTGATT TATCATTTAC TTAACTATAA AGGTAAAAAT
TCAGGGCTAA TAGGTACAGT AAAAGTCGAT ACCGGTAAGA GAACAATACC CGGAAACTTA
ACAACACCTG AACCGGTTAC CCTACAAAAA TATCTTGATG AAATGGTAAA ACACAATCTT
AATTATGCCT GTATGGAAGT CTCCTCCCAT GGTATCAAAT TAAAGAGGAT TACCGGTAGT
CAATTTGCAA TAAAAGTTGG TACTAACATT ACAGTCGACC ATTTTGACCT TCATTCAGAC
TTCTCTGATT ATGTCCAGGT AAAAAAATCC TTTCTGGAAG ATAAAAACCC CCATACCCTT
GTTTTATTAA ATAATGATGA CCATTATTTA AGTTCTTTTG GTAATATCGC TAAAAATCAA
ATTGGGTATG GGATTACCAC AAATACAGAT ATTACAGCAG AAAATATTAA TTACAGCGGA
ATTACTACTG ACTTTGTTTA CTCACTAAAT AAATCAATAA AAACCAGCCA GGGTAATAAA
ATAGGACCGA TGAAGGTCCC TATTAATCTT AAAATACCTG GAGAACATAA CATTTATAAT
GCCCTGGTAG CTATAACAAT TGGCCTCTAT TATGGTTTAA CACCTGAAAA AATCCAGGAC
TTTTTTGGCC AGTTCAGGGG AATCTGGCGG AGATTCCAGG TGATTTACAA CAAAGATTTT
GCAATTATAG ATGACTGTGC CCATAATCCC GGTAGCTATG GAGCAGTTTT TAAAACAGTA
AGCCAGCTCA AATATAAAAA TCTATTAATT GTTAATGCTA TCAGAGGAAA CAGAGGAGCC
CAGATCAATA AAGGAAATGC AGAAACAATA GGAAAGTGGC TTAAAAAATT TCACAATTAC
TATTTGTTAA CCACAAACTG TAATGATGTT GTTAAACCAA TTGATAAGGT TAGCCCTGAG
GAAGAAAAAG TTTTCCTGCA GGCCCTGGAC AAAAACAATA TTAAATATAG CCATCTCGAT
CAATTAAAAC CTGCCTTAAA AAATGTTCTG GATAAGGTTA CACCCGATGA TATAATTCTC
CTACTGGGGG CCCATGCTAT GGATGAAGCC GGTGACATGA TTCTAGAGAT GATCAAGGAA
TAA
|
|---|
| Protein sequence | MVMERKEDLP AFTDITCDSR EVKPGYAFVA ITGFKNDGHN FIEEAINKGA SVIFTEKEIK
SRSGIPIVRV KDSRSILGKL AAEFYNYPSR KLKLIGVTGT NGKTTTTHLI YHLLNYKGKN
SGLIGTVKVD TGKRTIPGNL TTPEPVTLQK YLDEMVKHNL NYACMEVSSH GIKLKRITGS
QFAIKVGTNI TVDHFDLHSD FSDYVQVKKS FLEDKNPHTL VLLNNDDHYL SSFGNIAKNQ
IGYGITTNTD ITAENINYSG ITTDFVYSLN KSIKTSQGNK IGPMKVPINL KIPGEHNIYN
ALVAITIGLY YGLTPEKIQD FFGQFRGIWR RFQVIYNKDF AIIDDCAHNP GSYGAVFKTV
SQLKYKNLLI VNAIRGNRGA QINKGNAETI GKWLKKFHNY YLLTTNCNDV VKPIDKVSPE
EEKVFLQALD KNNIKYSHLD QLKPALKNVL DKVTPDDIIL LLGAHAMDEA GDMILEMIKE
|
|---|
| |