Gene Hore_00670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00670 
Symbol 
ID7314285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp78930 
End bp79937 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID643610485 
Productbasic membrane lipoprotein 
Protein accessionYP_002507823 
Protein GI220930915 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGGT CAAATCTAAT TTTGACTATT TTAATTGTTG CTATTATTAT TGCCGGTGCA 
GTTTATTATT TAAACCAGGG TGAAGAAGAA CAGGCTGTCA AGGATACATT TAAAGTTGGC
ATGGTAACAG ATGTCGGGGG TCTGGGTGAC CAGTCCTTTA ATGATGCTGC TTACCGTGGT
TTGAAGAGAG CAGAGGAAGA ACTGGGTATC GAAATAGAAG TCGTTGAGTC CAATGCCATG
ACAGATTATG TACCCAACCT GAGCAGTCTT GCTGAACAGG ATTATGACAT GGTCTGGGCT
ATTGGCTTTT TAATGATGGA TGCCCTAAAC CAGGTTGCCG AGATGTATCC TGATACTACC
TTTGGTCTCG TTGACGCTGT GGTTGATAAG CCCAATGTAG CTTCTGTTAC CTTTAAAGAA
GAAGAAGGTT CTTTCCTTGT TGGATTAATT GCCGGTAAAA TGACTGAAAC CGGAAAGGTT
GGTTATGTTG GTGGTATGGA AATGCCGTTA ATCCAGAAAT TCCAGGCTGG ATATGAGGCC
GGAGTAAAGG CTGCTAACCC TGATGCCGAA ATTATGATTG GCTACACTGG AGCTTTTGAT
GATCCTGCTG CCGGTAAAGA ACTGGCTCTT ACCCAGTTTG GTCAGGGTGC CGATATCATT
TATCACGCTT CTGGTGCCTG TGGTATCGGA GTTATTGAGG CTGCTGAAGA AAAAGGTCTG
TATGCTATTG GTGTAGATTC ACCCCAGGCC CACCTGGCTC CGGAAAATGT CCTGACCAGT
ATGGTAAAAC GGGTTGATGT TGCTGTTTAT AATGAGGTTA AATCTCTTTA TGAAGGCAAT
TTCGAACCAG GTCATAAAAT TTATGGGCTT GCTGAAAACG GTGTTGGCCC CAGTGAACAT
GCCAATGAAA TGGTTCCTGA GGATGTAATG GAACTTGTAG AGGAATATAA AGAAAAGATT
ATTAACGGTG AATATACAGT ACCAACTAAA CCTGAAGATG TAGAATAA
 
Protein sequence
MKRSNLILTI LIVAIIIAGA VYYLNQGEEE QAVKDTFKVG MVTDVGGLGD QSFNDAAYRG 
LKRAEEELGI EIEVVESNAM TDYVPNLSSL AEQDYDMVWA IGFLMMDALN QVAEMYPDTT
FGLVDAVVDK PNVASVTFKE EEGSFLVGLI AGKMTETGKV GYVGGMEMPL IQKFQAGYEA
GVKAANPDAE IMIGYTGAFD DPAAGKELAL TQFGQGADII YHASGACGIG VIEAAEEKGL
YAIGVDSPQA HLAPENVLTS MVKRVDVAVY NEVKSLYEGN FEPGHKIYGL AENGVGPSEH
ANEMVPEDVM ELVEEYKEKI INGEYTVPTK PEDVE