| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00560 |
|---|
| Symbol | |
|---|
| ID | 7314274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 63977 |
|---|
| End bp | 65383 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643610474 |
|---|
| Product | tRNA(Ile)-lysidine synthetase |
|---|
| Protein accession | YP_002507812 |
|---|
| Protein GI | 220930904 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0427403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGTTGC TGAAGAAATT TAGAGAATAT ATTAACCATC ATAAACTTAT TAAAAAGGGA
GATGGGGTCC TTGTCGGTGT ATCTGGAGGA CCTGATTCCC TGACCCTGCT GGATATGCTG
GTCAGGGTTA AAGATGAATA TGGTTTGAAA CTGGTTGTCT TCCATTTAGA CCATAAATTC
AGGCAGGAAG CAGCCCGGGA GGCAAGGTAT GTTTCAAATA TAACAAACAA CTATGGTCTT
AAATGTATTA TTGAAGAGTT TGACGTACCC GGGTTGATGA ATGATGAAGG GTTATCTCCT
GAGGAAGCAG CCCGGAAAGT CAGGTTTAAT TTAATGATAA AATGGGTTAA TAGTTTAAAC
CTGAATAAAA TAGCTGTTGC CCATAATAAA GATGATCTGG TAGAAACCGT TTTTCTCCAT
ATGTTCCGGG GGACCGGTTT AAAAGGCTTG ACCGGTATCG ATCCGGTATC AAGGATTGGA
GGGGTTGAGG TAATTCACCC CCTCTTAAAT ATTTACAGGC AGGAAATAAT GGATTATTGT
CAAAGGCGAA ATTTAAATCC AGTATATGAC CCTACCAATC AGGAAACAAT CTATACCAGG
AATAAAATAA GGCATCATAT TATTCCATAT ATCGAAGATG AAATCAATCC GGGATTAAAG
GATGTTATTT ACCAGATGGC TGAAGTAGTA AGGGAAGAAA ATAACTTTCT GGATTATCAG
GCTGAAAAAA ATCTTAAAAA GGTACTGGTA GATAAAGGGC AGGACTATGT TATCCTGTCA
CTGGAGAAAC TATTTAAATT ACCCCTGGTT ATAAGGCGCA GGATTACCTC CCTTGTCAAC
AGCAAGCTAA AGGGAGAGGA TAATAATTTA TACCGGAAAC ACTATGAGAT GGTTGAGAAT
CTCATTAAAT CAAAGGTTAC CGGAAAACGT TTTGATTTGC CAGATGGGGT TGTTGTTGAA
AAAAGTTATG ATAAAATAAT ATTCAGGAAA AATAAAAAAA TAAACGAGTA CTGCATAAAT
TTTAATATCC CAGCAGAAAT TGACCTGCCC CGGGGAATAA TATTAAAGGT GTCAGAGGAA
AAACTCCCTT CAAACTGGCG GCAACTTGTT CAAAATCCAG GTATTTGCCT TTGTGATCTT
GAAAAAATAG AGTTACCATT AATTGTTAGA CCGAGAAAAC CTGGAGACAG ATTCATTCCA
CTGGGAATGA AGGGATATAA AAAGGTAAAG AATTTTTTTA TTGATGAAAA AATTCCCCGT
TATCAAAGAG AGAATATTCC TGTAATCCTG GACAACAAGG GGAGGATTAT CTGGTTAGCC
GGTTTAAGGA TGGATGATAG ATTTAAAATT ACAGATGATA CCAAAAAAAT AGTCAGATTT
GAAATAACCA ATAATAAGGA GGAATAA
|
|---|
| Protein sequence | MELLKKFREY INHHKLIKKG DGVLVGVSGG PDSLTLLDML VRVKDEYGLK LVVFHLDHKF
RQEAAREARY VSNITNNYGL KCIIEEFDVP GLMNDEGLSP EEAARKVRFN LMIKWVNSLN
LNKIAVAHNK DDLVETVFLH MFRGTGLKGL TGIDPVSRIG GVEVIHPLLN IYRQEIMDYC
QRRNLNPVYD PTNQETIYTR NKIRHHIIPY IEDEINPGLK DVIYQMAEVV REENNFLDYQ
AEKNLKKVLV DKGQDYVILS LEKLFKLPLV IRRRITSLVN SKLKGEDNNL YRKHYEMVEN
LIKSKVTGKR FDLPDGVVVE KSYDKIIFRK NKKINEYCIN FNIPAEIDLP RGIILKVSEE
KLPSNWRQLV QNPGICLCDL EKIELPLIVR PRKPGDRFIP LGMKGYKKVK NFFIDEKIPR
YQRENIPVIL DNKGRIIWLA GLRMDDRFKI TDDTKKIVRF EITNNKEE
|
|---|
| |