| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00550 |
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| Symbol | |
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| ID | 7314273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 61533 |
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| End bp | 63905 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643610473 |
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| Product | Serine/threonine specific protein phosphatase spoIIE |
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| Protein accession | YP_002507811 |
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| Protein GI | 220930903 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00773403 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGGAC AAGTTGAATC AGTAAAAAAT TATAGTTTTT TGAAAGATAA TATTAAAACC
AAAAGTAAAT TATCATATTT TTTTTATTAC CTGATAATCG GGGTTTTAGG TTTTATCCTC
GGCAGGGCAG AGGTGTTTAG TGGATATTAC CCTTTTTCCC TGATATACTG GATGGGTTTT
GCCCTGGAAA GCCCACTGGT AATGATTTAC ATCACTGTAG TAAGTGGAGC AGGGCTGGCC
TGGAATGGAG ATTATTTGAA TCTTATTTAT CTGCTGGCTG GATTTTCAGG GGTTATCCTC
AGTAGTTTTT TTAAAAAAGG GAAAGATTCT ATTTTCTTTC CGGTAGCTAC GGGATTATGC
TATCTTGCCC TGTCCATTGT CAGAGGGATA ATTTATCAAA AACCCCTTTA CTGGTTTGTA
ATAACAGGTA TTGAAGCCCT TGGTATTATA CTAGTTTTTT TATTATTAAA GGGTACCAGA
ATACATATTT TTGATAAGCA GGGGTTTGTA AAGGCTTCAC CAGTGGTGTT ATTGATAACC
AGTCTGGGAT TTCTGGTGGG GATTGCCAAT ATTGATTTTG TTCCCTTTTT TGTCTTACAT
ACATTTATCT ATTTGTTTGT CAGTGGTGTT GCCTATATTT CCGGGTTTAG TTATGCAGTT
ACTGTTTCGG TGTTGTATGG TTTAATATTG AGTGGGCTGG GTCTGATACC ATTTGTAGTT
ATGTTGAGAA TTTTAATTAT CGGCGTTATA ACAGGGCTTT TTAAAAGAAA ACCTAAATAT
ATGTTTATAG TAGGTTATTT TTTAACCTTT TTAGTATATT CTGGTTTTTC ACCAGGATTA
TATGATTTAA AAGAGGCTGG TTATGGGTTT GGGATTGCGC TGGCCCTTTA TCTGGTGATA
TCTGAATCCC TGTGGGTACA ACTACTGTCG GGTTTAAAAC CCAGTCCTTC CCGGGTTAAA
AAGTTGAAAA CAGATAATGA GTTAAATAAA ATTTTTAAAC AACACCTGCT GGAATTGAGC
CGGGTTTTTA AAGAATTAAG TGTTACGTTT AAAGAGGTTT TACCTGATGA GGAAGAAGAA
GAGAACCTGG AAGACCTGGC GTTTATTTTA AAAAATAAAG TCTGTCAGAG ATGCCCCCGA
CTTAAAATAT GCTGGAAAAA GGAACGGGCA GACACCTATA TGAAACTCAG CAGGTTAGTT
GAAAAGGCCA GGAAAGCCGG TAAAATAGAA AAACCAATGT TTAATAACCT ATTTAAAGAT
AAATGTCCTT TTATCAACAA AATTATCGGT GGGGTTAAAA GTAGTTATGA AATATACCAG
GTAAATAAAT TCTGGCGGGA AAGACTGGAT GATAAACAGC GTATTGTTTC TGAACAACTG
GCGGGACTGA GCGAAATAAT TCAGCAATTT TCCCAGTCTT CAGGTATTGT ACTAAGGGAT
AACCCGACAC TTTCCCACAT ATATGAAAGG GCTGTTAACC GGGGAATTGA TGTTTATAAT
CTGGAGGTTG ATACTAATAT TTATTCATCC CGTCTTAATA TTGTAGCAGA AATGGAACCC
TGTAGTGATA CCAGACCCTG TGAAGAACAG CTTTTACCCC TTATTAGCTC TGAATACCAA
TATAATTTCA GGGTAATAAA TAAAAAGTGT GGTAATAAAC TTAAAGATAT TCCCTGTAAA
TTATTATACG CCCCCCGGGG TAGCTATAGC CTTGAATATG CTGTTTTACA GAAGGCAAGT
ACCGGGAAAA TATCAGGGGA TACATATCTT TTTAGACCTT TGAGGGATGG TAAGGATTTA
ATTGTCTTAA GTGATGGGAT GGGAGTTGGG AAAAAGGCCT ATCAGGAAAG TAAAGCTGCT
GTGAATCTCC TTGAAAAGAT TATTGAAGCC GGTTTTGACC GGGATCTGGC GATACGGACA
ATTAACTCAG CCCTGTATTT CAGAAGCCAG GAAGAAAGTT TTACAACTCT GGATATCGGC
TTTTTTGATA CTTTTACCGG GGAACTTATC TTCAATAAAA TCGGGGCAGT ATCAAGCTTT
GTGAAACGGG GTTTTGAGGT TTTGCAGATA AAGGCTTCTT CCTTACCGGT TGGAATTTTA
GAGAAGGTTG AAATTTCTAC TCATTCTGTA AACCTAAAGG AAAATGATTT TGTTATTATG
GTGACCGATG GGGTCCTGGA TTCGAGTCCT GACATTCAGG ACAAAGAAGG TTGGTTTATG
AGAATACTTC AGAATTGTTC TTTTGATAAC CCCAGAGAAC TGGCATCATA TCTTATGGAG
GTTGTTACCG GGGCCCAGGG CGGAGTTGAT GATGATTTAA CTATTATTGT ATTTAAGGTC
AACAAATTTT TAGAAAAAAA GCAGGAAATT TAA
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| Protein sequence | MFGQVESVKN YSFLKDNIKT KSKLSYFFYY LIIGVLGFIL GRAEVFSGYY PFSLIYWMGF
ALESPLVMIY ITVVSGAGLA WNGDYLNLIY LLAGFSGVIL SSFFKKGKDS IFFPVATGLC
YLALSIVRGI IYQKPLYWFV ITGIEALGII LVFLLLKGTR IHIFDKQGFV KASPVVLLIT
SLGFLVGIAN IDFVPFFVLH TFIYLFVSGV AYISGFSYAV TVSVLYGLIL SGLGLIPFVV
MLRILIIGVI TGLFKRKPKY MFIVGYFLTF LVYSGFSPGL YDLKEAGYGF GIALALYLVI
SESLWVQLLS GLKPSPSRVK KLKTDNELNK IFKQHLLELS RVFKELSVTF KEVLPDEEEE
ENLEDLAFIL KNKVCQRCPR LKICWKKERA DTYMKLSRLV EKARKAGKIE KPMFNNLFKD
KCPFINKIIG GVKSSYEIYQ VNKFWRERLD DKQRIVSEQL AGLSEIIQQF SQSSGIVLRD
NPTLSHIYER AVNRGIDVYN LEVDTNIYSS RLNIVAEMEP CSDTRPCEEQ LLPLISSEYQ
YNFRVINKKC GNKLKDIPCK LLYAPRGSYS LEYAVLQKAS TGKISGDTYL FRPLRDGKDL
IVLSDGMGVG KKAYQESKAA VNLLEKIIEA GFDRDLAIRT INSALYFRSQ EESFTTLDIG
FFDTFTGELI FNKIGAVSSF VKRGFEVLQI KASSLPVGIL EKVEISTHSV NLKENDFVIM
VTDGVLDSSP DIQDKEGWFM RILQNCSFDN PRELASYLME VVTGAQGGVD DDLTIIVFKV
NKFLEKKQEI
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