| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00480 |
|---|
| Symbol | |
|---|
| ID | 7314265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 53950 |
|---|
| End bp | 55980 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643610465 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002507804 |
|---|
| Protein GI | 220930896 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTTAA AAAAATTAAA TATTTTTTCG CCCATTTATA GAATATTGAA AAAAATAATA
AGTAGTTATT CCCTTTACAC CAAATTATTG CTGTTCTTTT TAATTGTAAT GATTATACCT
CTTGGTTTGA CCTTTTATAA TGATTATCGC TTGACCAATG ATTCCCTGGA AAAGAGGCTG
GATGAAAAAA TACTGACCGG GAAAAATTTT GTAGAAAGGA TATATGAATC TGATATCAAT
AGGGTTGAAG GGCTGGCGGT TATAAAAGCC AGTGATACCT CAATCCAGGA AACCGTTGCT
ACCAAAAATT TGTTGCAGTT GATGAATATT CTCAGGCCGG CATTTATTAA TAAAAACAAT
ATTGATCTAG CCGCTATTTT AGATAGCAAG GGTAAAGTTA TAACCCGCCG GGGAAACCTC
CCTAATAAGG ATTATAAACT GGAGTCCAGG TACATAGAGG GGATAAATGA TAAAAGGATC
TCTGTTAACC AGATTGAGAT GACCACAGAG GGGATAGTTA TCAAGGGAGC CCAGGCTATT
ACTGACCCCG ATCAGGCTAA CCTGGTTCAC GGTATCTTTT TAACCGGGCT TGTTATGGAT
AAAAGTTACT GGATAGATTT AAGTCAGGAC CTGGGAATGG AAATAATATT ATTTGATAAA
GATGGTCAGC CTGTTACAGC TTCTTTCAGT AATGAAAAGC TTTCTAAAAT AAGTTTAAAA
ACTAATACAG AGGATAGCAA CAACATATGG GTAGATCATT TAATTTCAGA TACAGAGTAC
AGAATGGTTG CTTTTCCGGT TACTGACCAT AATAGTAAAA TTATTGCCTA TCTAGGGGTA
ACAACACCCA AAACCCCTAT ACTAAATGCA GGCAATAAAA TGAAACAGTC GATGATTATT
TATGCTCTTA TCGGTGCCTC TATTGCCATA CTAGTGGGGA TATTTCTGGC CAGGAGTATC
AGTAAGAGGG TTAAAGGCTT AATCAGTGTA GTCGAACGGG TCGCTGAAGG TGATCTGAGT
CAGAAGATAA AGATCAAAGG CCGTGATGAA ATAGCTTACC TCGGTAAGAG TCTGAACCAG
ATGGTTAATA ATTTAAAGGG CCTGGTAATA GAAGTTATGT CCAGTTCTAA TCAGGTTGCG
TCTGCGGCTC AGGAGCTGGC CGGTTCCAGC CAGGAAGCCA CCGCTATAAC GGAACAGGTT
ACAGCTACCA GTGAAAATAT TTCAGATGGA ACTGCTGAAC AGGTAGAAAA AATTAATGAA
GCATCATTAA TTATTAAAGA AATGTCCCGG TCTATTCAAG AAGTGGCTAA AGGGGCCCAG
GAGGTTGCGG GTAAATCAAA GACTGCCCGG AACCAGGTAG AACTGGGTCA GGAAGCTTTA
GAAGACTTGC TCCATCAGAT TGATAAAATT GGAGAAATAG TAGAACAATC AGCCAGGGTT
ATAAAACAAC TCGATACCCG GTCCAAGGAA ATTAATAAAA TTATCGGATT AATCAGTGAA
ATTACCGAAC AGACAGACTT ACTGGCCTTA AATGCCGCTA TAGAGGCGGC CCGGGCCGGA
GAACATGGCC GGGGTTTTGC CGTAGTAGCT GATGAGGTAA GAACCCTTGC CAACCAGTCA
AATGAGGCTG CTACCAATAT TAGCAAGATT ATAGAGGAAA TTCAGAATGA TACCCAGAAA
GCAGTAGATG TTATGGATGA GGGAACCACG GTGGTAGAAG AGGGTAATTT TGCTGCTGGT
AAGGCTAAAG ACACATTTGC CGGGATCAGA CAGGCTGTTG AAGATACCTC AAAAATTGCT
GAAAGTATTG CTGAGGCTAC CAGGGAACAG AAACATGGTA GTGATGAAAT GGTAACTGCC
ATAGAGGAAA TTAATAATAT ATCCCAGAAT ACAGCCCAGG GTGCTGGTCA GATTAACCAG
GCTATAAGTG AACAGTCTCA GACCATCGAA GGTATTTCCA ATTCTTCAGA AACCCTGGCT
ATCATGGCAG ATAAACTCAG AGGATTAATT GATAAATTTA AGACTGAATA G
|
|---|
| Protein sequence | MFLKKLNIFS PIYRILKKII SSYSLYTKLL LFFLIVMIIP LGLTFYNDYR LTNDSLEKRL
DEKILTGKNF VERIYESDIN RVEGLAVIKA SDTSIQETVA TKNLLQLMNI LRPAFINKNN
IDLAAILDSK GKVITRRGNL PNKDYKLESR YIEGINDKRI SVNQIEMTTE GIVIKGAQAI
TDPDQANLVH GIFLTGLVMD KSYWIDLSQD LGMEIILFDK DGQPVTASFS NEKLSKISLK
TNTEDSNNIW VDHLISDTEY RMVAFPVTDH NSKIIAYLGV TTPKTPILNA GNKMKQSMII
YALIGASIAI LVGIFLARSI SKRVKGLISV VERVAEGDLS QKIKIKGRDE IAYLGKSLNQ
MVNNLKGLVI EVMSSSNQVA SAAQELAGSS QEATAITEQV TATSENISDG TAEQVEKINE
ASLIIKEMSR SIQEVAKGAQ EVAGKSKTAR NQVELGQEAL EDLLHQIDKI GEIVEQSARV
IKQLDTRSKE INKIIGLISE ITEQTDLLAL NAAIEAARAG EHGRGFAVVA DEVRTLANQS
NEAATNISKI IEEIQNDTQK AVDVMDEGTT VVEEGNFAAG KAKDTFAGIR QAVEDTSKIA
ESIAEATREQ KHGSDEMVTA IEEINNISQN TAQGAGQINQ AISEQSQTIE GISNSSETLA
IMADKLRGLI DKFKTE
|
|---|
| |