| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00450 |
|---|
| Symbol | |
|---|
| ID | 7314262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 52044 |
|---|
| End bp | 53162 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643610462 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002507801 |
|---|
| Protein GI | 220930893 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGTG TAACATTAGA GAATGTTGTT AAGAGGTTTG ATGATGTAGT TGCTGTAAAC
AATGCTAATC TTGAAATCCG GGATAAGGAG TTCTTAGTTC TCGTTGGACC TTCCGGATGT
GGTAAATCAA CAACTCTGAG GATGATTGCC GGTTTAGAAG AAATCACAGA AGGAACTATT
AAAATTGGAG ATACTGTAGT TAATGATGTA CCTCCTAAAG ACAGAGATAT TGCTATGGTT
TTCCAGAATT ACGCTTTATA CCCACATATG GACGTTTACA ATAACATGGC TTTTAGCTTA
AAATTACGTA AATTCCCTAA AGATGAGATT GACCGTCGTG TTAAGGAAGC TGCCAGGATT
CTGGGTATTG AGGACTTGCT TGATCGTAAG CCAAAGCAGT TATCCGGTGG TCAGAGGCAG
CGTGTTGCTC TGGGAAGGGC TATTGTAAGG GAACCTAAGG TTTTCTTGAT GGATGAGCCC
CTTTCCAACC TGGATGCTAA ACTCCGTGTT CAGATGCGTA CTGAATTAAG TAAATTGCAC
GACAGGTTAC AGACAACTGT TATCTACGTT ACCCATGACC AGGTCGAAGC TATGACCATG
GGTGACAGAA TTGTAGTTCT CCGTGATGGT GTTATCCAGC AGGTTGATGA TCCATTGACC
CTTTATAATA AACCAAATAA TATGTTCGTA GCTGGATTTA TTGGTAGTCC TGCTATGAAC
TTCCTGGATT GCAAGCTGGT TAAAGAGGGA GACAAATATT ATCTTGATGG CCATGGTTCC
TTCAAGATTG CTATCCCTGA AGATAAAATC AATGAAGCAC CTGAAATTAA GGAATATGAA
GGCCGTGAAG TAGTCTTCGG TATCAGGCCC GAGGACCTGG TAGATGCCAG TATTAAGCAT
GATTTCGACG TTACCGATGA TAATTCTTTC ACTGCCAATG TTGAAGTAGT TGAACCCATG
GGTTCAGAAA TTTATCTTTA CCTCGGCATT AACGACCATT CCATGATTGC CAGGGTAGAA
GCTGAAAGTA CTGCCCAGGT TGGGGATAAT GTTAAACTCG GGGTAGACAC AAGAAAAATG
CATGTTTTTG ATGCTGAAAC AGAAGAGGCT ATATTCTAA
|
|---|
| Protein sequence | MASVTLENVV KRFDDVVAVN NANLEIRDKE FLVLVGPSGC GKSTTLRMIA GLEEITEGTI
KIGDTVVNDV PPKDRDIAMV FQNYALYPHM DVYNNMAFSL KLRKFPKDEI DRRVKEAARI
LGIEDLLDRK PKQLSGGQRQ RVALGRAIVR EPKVFLMDEP LSNLDAKLRV QMRTELSKLH
DRLQTTVIYV THDQVEAMTM GDRIVVLRDG VIQQVDDPLT LYNKPNNMFV AGFIGSPAMN
FLDCKLVKEG DKYYLDGHGS FKIAIPEDKI NEAPEIKEYE GREVVFGIRP EDLVDASIKH
DFDVTDDNSF TANVEVVEPM GSEIYLYLGI NDHSMIARVE AESTAQVGDN VKLGVDTRKM
HVFDAETEEA IF
|
|---|
| |