Gene Hore_00290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00290 
Symbol 
ID7314940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp35867 
End bp36742 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID643610447 
ProductIntegrase catalytic region 
Protein accessionYP_002507786 
Protein GI220930878 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATATG GTTTCATCCG GGATCACAGT AATGAATTTG CTGTGGAGAA GATGTGCCAG 
GTTTTAAATG TATCCCGGTC AGGATATTAC AGCTGGTTAA ATAGAAAACC TGGTAAAAGA
GAGTTAACAA ATAAAAAGTT AAAGTTGAAG ATAGCTGAAA TATACTGGCA GACCAGGGGA
AGGTGTGGTA GCCCCCGGAT ACATAAACAG CTTAAAAAAG AGGGTTATCA TTATAATATT
AAGCGTATTG AACGACTAAT GAGGATAATG GGATTAAAAG CAATACAGAA AAGAAAGTTT
AAAAGGACAA CTAATTCTGA CAATAATCTC CCTTTAAAAA ATAATCTTCT CAAACGTAAT
TTTAGCGTTA CCCAACCTGA TAAAGTCTGG GTATCAGACA TAACATATAT TCCAACAAAA
GAAGGCTGGC TTTATCTTTC AGTAGTGATT GACCTCTATT CTCGCAAGGT TGTTGGTTGG
TCAATGGACA ATCATATGAC AAAAAGGTTA GTGATTGATG CATTGGAAAT GGCCGTACTA
AATCGTAATC CCTCCAGGGG ATTAATTTTT CATTCTGACA GAGGTAGTCA GTATGCCAGC
CATGATTTTC AAAAAACACT GTGGAAATAC GGTATTATTT CATCAATGAG CCGCAAAGGT
GATTGCTGGG ACAATGCAGT AGCTGAAAGT TTTTTTGCAA CACTAAAAAC AGAATTGATT
TTCCACAACA AGTATCAGAG CAGGGCTCAG GCAAAACGTG ATATATTTGA GTATATAGAG
ATTTTTTATA ATAGGATTCG ATTACATTCT TCACTAGATT ATAAAAGCCC GGAAGATTAC
GAGAAAGAAA GAAAAACGTC TAAACTATGT GTCTAA
 
Protein sequence
MIYGFIRDHS NEFAVEKMCQ VLNVSRSGYY SWLNRKPGKR ELTNKKLKLK IAEIYWQTRG 
RCGSPRIHKQ LKKEGYHYNI KRIERLMRIM GLKAIQKRKF KRTTNSDNNL PLKNNLLKRN
FSVTQPDKVW VSDITYIPTK EGWLYLSVVI DLYSRKVVGW SMDNHMTKRL VIDALEMAVL
NRNPSRGLIF HSDRGSQYAS HDFQKTLWKY GIISSMSRKG DCWDNAVAES FFATLKTELI
FHNKYQSRAQ AKRDIFEYIE IFYNRIRLHS SLDYKSPEDY EKERKTSKLC V