Gene Hore_00190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00190 
Symbol 
ID7314930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp27211 
End bp28467 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content36% 
IMG OID643610438 
ProductABC transporter related 
Protein accessionYP_002507777 
Protein GI220930869 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00177587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA TTAAAAACCT CAATTTTGGA TATTATAATA AGGCAATACT GAAGAATGTT 
TCGCTGTCTA TTGAAAACAA GGAGTTTATA GGTATTATAG GTCCCAATGG GTCGGGTAAA
TCAACCCTCT TAAAGAATTT AAGTAAAATA TTATCGCCTG AATCTGGATT AATATATCTT
AATAAAAGAT TATTAAATGA TTATTCAGTA AAGGAGTTAT CCCGTATCCT TTCCGTAGTC
CCCCAGGATA CTTCTATTCA GTTTAACTTT ACTGTTTATG ATTTAATATT AATGGGGAGA
AATCCCTATA TGGACAACTG GGGACGTGTA ACCCGGGAAG ATAAAGTTAT AGTAGAAGAA
GTAATGGAGC TAACAGATAC CAGTAAGTTA CGGGATAAAA AGGTCAGGGA ATTGAGTGGT
GGGGAACGAC AACGGGTTAT TATTGCCCGG GCTCTGGCGC AACAACCTGA AATATTACTT
TTAGATGAAC CCACAGCCAG TCTAGATATT AACTATCAGC AGGAGATTTT TGAATTGCTG
TCTCATTTAA ACAAAACCAT GAACCTGACC ATCTTACTGG TATCACATGA TTTAAACTTA
ACAGGTCAGT ATTGTAAAAG GCTTATCCTT TTAAAAGATG GGAAAATATT TGCTGCCGGT
TCTCCAGAAG AAGTATTAAC ACCGGCAAAT ATAAAAAAGG TATATAATAC TGAAGTTAAA
GTATTAAATA ACCCCATATC CAACAAACCC TATGTGGTTT TAATTCCTGG AAAAGAGAAA
AAGAGACAGA GGATAAAACC AACCCAAAAA CCCCGGGTAC ATTTGATTTG TGGTGGAGGG
TCCGGAAAGG AACTTATGAA TACATTACAC CAGCAAGGTT ACCGGGTAAG TACCGGTGTT
TTAAATCAGG GGGATAGTGA CTGGGAGAAG GCCATGGAAC TGGGTATACC AGTAGTTGAG
ATTCCACCTT TTGCCCCCAT CTGTGAAAAG AGCCTGAAGG ATAATGTCGC TTTGATACGG
GAAAGTGATG TTATAGTAGT AGCAGATACA CCATTTGGAT ATGGTAATAT TGATAATCTT
AAAGCAATCA GTGGTATTAA AGATAAACCG ATAATAATAG TAAATTCTCA TAACATAAAA
GAAAAAGACT ATACAGATGG CCTGGCTAAT AAATACTGGA GTGAAATGGA GAAAAGAGCA
AATTGTTATT CCGTTAAAAA TGAAGATGAG GTATTGTCTT ATCTAAATAA ATTATAA
 
Protein sequence
MIEIKNLNFG YYNKAILKNV SLSIENKEFI GIIGPNGSGK STLLKNLSKI LSPESGLIYL 
NKRLLNDYSV KELSRILSVV PQDTSIQFNF TVYDLILMGR NPYMDNWGRV TREDKVIVEE
VMELTDTSKL RDKKVRELSG GERQRVIIAR ALAQQPEILL LDEPTASLDI NYQQEIFELL
SHLNKTMNLT ILLVSHDLNL TGQYCKRLIL LKDGKIFAAG SPEEVLTPAN IKKVYNTEVK
VLNNPISNKP YVVLIPGKEK KRQRIKPTQK PRVHLICGGG SGKELMNTLH QQGYRVSTGV
LNQGDSDWEK AMELGIPVVE IPPFAPICEK SLKDNVALIR ESDVIVVADT PFGYGNIDNL
KAISGIKDKP IIIVNSHNIK EKDYTDGLAN KYWSEMEKRA NCYSVKNEDE VLSYLNKL