| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00120 |
|---|
| Symbol | |
|---|
| ID | 7314907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 13793 |
|---|
| End bp | 14968 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643610415 |
|---|
| Product | spore germination B3 GerAC family protein |
|---|
| Protein accession | YP_002507770 |
|---|
| Protein GI | 220930862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC GAATTCTACC AGCAATAATG GTTATAGTTT TAATATCTAT CCTGTTAACA
GGGTGCTGGG ATTTAAAGGA TATAGATGAG AGGGCAACAG TTCTGGCAAT TGGAATAGAT
TATGCCGATA TTCCCCAGCC CGGCAATTTT GAAGGTTCCT ATATGGTTAA GGTTACCCTC
CAGATTGCTA TTTCTGAACA GATGACCGGT GGGGCCGGGC AGGCCCCTCC CATGGGGGAA
CAGGTTGTCT GGAATATCAG TTCCACCGGG GCCACGATGG CCCGGGCTAT AGAGCTCTGC
CAGGAAAAAT TAAAATATAG TCTTTTTTTT GGTCATGTCC GAATTTTGAT ATTTGGTCAG
AAAGTGGCCC AGAATGGAGT TAACCAATTT TTAAATTATT TCAGAAACCA TCCTATGTTC
CGTAGATTAT CTTATATTCT AGTTAGTAAG GGGGATGCAG CTGATGTTTT AAAGACCTTT
CCTAAATCAG CTACAATTCA GGCCATGTTC TTAATGAATA TGGTGGAAAC AGCCCAGAAT
ACAGGGCGTA TGCCCGATAT ACCCTTTATG GAGTTTGTGG TCAGGTTAAT AGACAAAGGA
ATTGACCCGG TGGCTATCAT GGTATCTTCC CACAAGGATT CGGTTGTCAA TACGGGAGTG
GCTGTCTTCC GGGGGGATAA TATGGTGGGG TCCCTTGATC TCTATGAAAC CTGGAATTTC
ATCCAGATTA CTGAAAACCA AAGAGGTGGT ATAGAGGTTG TCAGGGATGT GGAGGACGAA
CTAGGGAGGG TAACCATCCA ACTGACAGGT GTTAATTCTA ATGTTAGACC TATAATTCAA
AAGAACGGAA AGGTTAAATT TATAATAGAT ATGGAGGTAG AAGGTCGGAT TGTTTCCCAG
GAAACCCAGA CTGACTATAA TGATCCGGTA CTTTTTTCAG CCCTGGAGGA GAGAGTGGAA
AAGGAATATA AACGTGAATT AGAACAGATG ATTAATAAAG TCCAAAAACA ATTTAAAGCA
GATATATTTG GTTTTGGCCA GCAGCTCAGG GCCTATCAGA ACCGGGAATG GAAGGAGATA
AATAACTGGA GAAAAGCCTT CAGTGAAGGA GAGCTGGACC TAACTATATA TGTAGATATC
CGGAGGATGG GGATGAGTAC CTTTACGAAA AAATAG
|
|---|
| Protein sequence | MKSRILPAIM VIVLISILLT GCWDLKDIDE RATVLAIGID YADIPQPGNF EGSYMVKVTL
QIAISEQMTG GAGQAPPMGE QVVWNISSTG ATMARAIELC QEKLKYSLFF GHVRILIFGQ
KVAQNGVNQF LNYFRNHPMF RRLSYILVSK GDAADVLKTF PKSATIQAMF LMNMVETAQN
TGRMPDIPFM EFVVRLIDKG IDPVAIMVSS HKDSVVNTGV AVFRGDNMVG SLDLYETWNF
IQITENQRGG IEVVRDVEDE LGRVTIQLTG VNSNVRPIIQ KNGKVKFIID MEVEGRIVSQ
ETQTDYNDPV LFSALEERVE KEYKRELEQM INKVQKQFKA DIFGFGQQLR AYQNREWKEI
NNWRKAFSEG ELDLTIYVDI RRMGMSTFTK K
|
|---|
| |