Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3486 |
Symbol | |
ID | 7312043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 4064426 |
End bp | 4065808 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643610398 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002507753 |
Protein GI | 220930844 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACATTG AAGATACAAT AGCGGCACTG TCAACACCAT ACGGAACAGG TGGAATTGGT GTAATACGAA TTAGCGGAGG ACAGGCATTT GATACAGCAA ATAAAATATT TAGAAGTTCA AAAACAATAG AGGAAATTCA TTCTCACACG GTAACATACG GAAAAATTGT GGATCCTAAA CTTAACGATG TGGTAGACGA AGTATTATTG CTTAAAATGT GTAAGCCTAA CACTTTTACT CGAGAAGATG TTATAGAAAT ACATTGTCAT GGCGGCATTG TTGTAGTGAA TCGTGTTCTT GAATTGATCT TTAAGAATGG GGTAAGACCA GCACAACCAG GTGAGTTTAC AAAACGGGCA TTTTTAAACG GAAGGATTGA TTTATCTCAG GCAGAGGCTA TAATAGACCT GATAAATTCA AAGACCGTTG AAAGCTCAAA AGCTGCCGTG AGTCATTTGG AAGGTAGGTT ATCATTAAGA CTAAAAAGCA TACGAGAAGT TTTAGTAGGA TTACTTGCCC ATATAGAGGT AACTGTTGAT TATCCGGAAC ATGATATAGA AGAGATAACA GGTGAAAATG TATTAGAGAA TCTCATCAAG ATAAAAGAGG AGCTTATCAC GCTGGCAGGA ACTTTTGAAA GAGGTAAGAT ATTACGGGAA GGAATAGATA TAGTAATTGC CGGTAAGCCA AATGTAGGAA AATCTTCTTT ACTAAATCAG TTATCCGGAA GTACCAAAGC TATCGTGACT GATATTCCGG GAACAACAAG AGATATTATT GAAGAATATG TTAATATAAA GGGAATTCCT GCAAAAATTA TTGATACGGC AGGTATCAGA AGTACAGAAG ATGTAGTGGA AACAATAGGT GTAAATAGGG CATATGAAGC CATTGAAAGT GCTGATTTAA TAATTGCTGT TCTTTCAGCG GATACAGGGG TTACGGAAGA AGACATACAA ATTTTAAAAA TGATAAAAAA TAAAAAAAGC TTGATTCTGA TTAACAAAAC TGATTTAGTA GAAAAGAACA GTATTTCCAA AATAAAACAG CAGTTATCAG AATGTGATAT TGTATTGGAA GCTTCAGTTA TTAAAGATGT AGGAATAGAA GAATTGGAAA CAGCAATATC TGGGTTATTT ATAAAAGGAG ACATATCCAG TAACAACGAA GTTTTATTAA CAAATGCACG CCACAAATAT CTTGTGGATA GAGCTATTAA TGATATTGAG CAGGCATTGA ATTCATTTGA AACAGGAATG CCGCTGGATA TGGTGACAAT TGATATAAAA AGCTGTGCAG ACAGTATAGG TGAGATTACA GGTGAATCTA TTGATGAAGC TGTTTTGCAT AATATATTTA GCCGTTTTTG CATAGGAAAG TAA
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Protein sequence | MYIEDTIAAL STPYGTGGIG VIRISGGQAF DTANKIFRSS KTIEEIHSHT VTYGKIVDPK LNDVVDEVLL LKMCKPNTFT REDVIEIHCH GGIVVVNRVL ELIFKNGVRP AQPGEFTKRA FLNGRIDLSQ AEAIIDLINS KTVESSKAAV SHLEGRLSLR LKSIREVLVG LLAHIEVTVD YPEHDIEEIT GENVLENLIK IKEELITLAG TFERGKILRE GIDIVIAGKP NVGKSSLLNQ LSGSTKAIVT DIPGTTRDII EEYVNIKGIP AKIIDTAGIR STEDVVETIG VNRAYEAIES ADLIIAVLSA DTGVTEEDIQ ILKMIKNKKS LILINKTDLV EKNSISKIKQ QLSECDIVLE ASVIKDVGIE ELETAISGLF IKGDISSNNE VLLTNARHKY LVDRAINDIE QALNSFETGM PLDMVTIDIK SCADSIGEIT GESIDEAVLH NIFSRFCIGK
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