Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3469 |
Symbol | |
ID | 7312027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 4039098 |
End bp | 4040579 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610379 |
Product | L-fucose isomerase-like protein |
Protein accession | YP_002507737 |
Protein GI | 220930828 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2407] L-fucose isomerase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000257161 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAACG TACCAAAAGT TAAACTCGGC ATTGTAGCAG TTAGCAGGGA CTGTTTTCCT GCGGAATTAA GTACGGAAAG ACGTAAAGCT GTTGTTAAGG CTTGTGCAGA AAAGGGTGTT GAAATAGTTC AGGCCGATAC AGTGGTTGAA AATGAAGTAG ATATACCCAA TGCTCTGAAG GAATTAAAGG ACGCCGATGC AAATGCTCTT GTTGTATACC TTGGAAACTT CGGACCTGAA GGACCAGAAA CCATGCTTGC CCAGAAATTT GACGGACCTG TAATGTTCGT AGCTGCTGCT GAAGAGTCTG AGGGAAATCT CAAAGGCGGA CGTGGAGATG CATATTGCGG TATGCTGAAT GCATCCTATA ACCTGGCTCT GAGGAAACTA AATCCGTACA TTCCTGAATA TCCGGTTGGA GACCCTCAGG ATGTTGCAGA TATGATTGGG GATTTTGAAA ATATTGCGAG AATACTGATT GGTGTCTCAA AATTAAAGAT ATTCAGTTTC GGTCCTAGAC CATTTAATTT TGTGGCATGT AATGCACCTA TTAAACCCTT GTATGATCTG GGCGTTGAAA TAATGGAAAA CTCTGAGCTT GATCTTTTTG AGGCATATAA TAATCATAAG GATGATCCTA GAATACCTGC AGTGGTTAAG GAAATGGAAG AGGAATTGAA GGATGGAAAC GGGTATCCGG GAATTCTTCC GAAGTTAGCA CAGTATGAGA TTACATTATT GGATTGGGCG GAACAGAATA AGGGAACTTC CGAATATTTT GTATTTGCTA ATAAGTGCTG GCCTGCATTC CAGACACAGT TTGGATTTGT TCCATGTTAT GTTAATTCAA GACTTGCAGC GAAAGGAATT CCTGTGGCAT GTGAGACCGA TATTTATGGT GCATTAAGCG AATATATAAT TACTTGTGCT ACACAGTTGC CTGCAACACT TCTTGATATA AACAACTCTG TTCCTAAGGA CATGTTTGAA AATAACAAGG AGTTATTTAA TGGATACACT CTTACAGACT TGTTTATGGG CTTCCACTGT GGAAATACTC CTTCATGTAT GATGAAAAAC CACACTATGA AATATCAGCT TATCATGCAT AGATTACTTG AGCCCGGCAA GGAACCTGAT ATTTCAAGAG GAACATTGGA GGGAACAATA AGACCCGGAG ATATTACTTT CTTCAGGCTC CAGGGAACAG CTGACTGTCA GCTGAGAAGT TATGTTGCCG AGGGTGAAAT TATAGATGTA GACCCTAAAT CTTTCGGTGG TATAGGCGTA TTTGCAATCA AAGAAATGGG CAGATTCTAC AGACATGTAC TGATTGCTAA GAGATACCCT CACCATGGCG GTGTAGCATT TAAGCATATG GGAAAAGTTC TGTTTGCTAC AATGAAGCTT CTGGGTGTTG AGGATGTAGC TTTCAATCAG CCTGCATCTA TACTTTATAA GGATGAAAAT CCATTCAAAT AA
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Protein sequence | MYNVPKVKLG IVAVSRDCFP AELSTERRKA VVKACAEKGV EIVQADTVVE NEVDIPNALK ELKDADANAL VVYLGNFGPE GPETMLAQKF DGPVMFVAAA EESEGNLKGG RGDAYCGMLN ASYNLALRKL NPYIPEYPVG DPQDVADMIG DFENIARILI GVSKLKIFSF GPRPFNFVAC NAPIKPLYDL GVEIMENSEL DLFEAYNNHK DDPRIPAVVK EMEEELKDGN GYPGILPKLA QYEITLLDWA EQNKGTSEYF VFANKCWPAF QTQFGFVPCY VNSRLAAKGI PVACETDIYG ALSEYIITCA TQLPATLLDI NNSVPKDMFE NNKELFNGYT LTDLFMGFHC GNTPSCMMKN HTMKYQLIMH RLLEPGKEPD ISRGTLEGTI RPGDITFFRL QGTADCQLRS YVAEGEIIDV DPKSFGGIGV FAIKEMGRFY RHVLIAKRYP HHGGVAFKHM GKVLFATMKL LGVEDVAFNQ PASILYKDEN PFK
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