Gene Ccel_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3430 
Symbol 
ID7311992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3992304 
End bp3993503 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content41% 
IMG OID643610339 
ProductROK family protein 
Protein accessionYP_002507698 
Protein GI220930789 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATGG GTAAAGCCGG AAATAATAAG CTATTAAAAG AGATTAATGA GACATCATTA 
CTTGAATTAA TAAGAATAAA CAAGCAGGTT TCAAAAGCTG GACTTGCACA AATAACCGGA
CTTTCACCTA CTGCATGTGG AACAATAGTC ACAAATCTGC TTGACAAAGG GTATATTCGT
GAAGCAGGGA TAGGAACGTC AAAGGGCGGC AGGAGGCCAA TACTGTATGA ATTAACCCCG
GGAAGCTATT TTTCTATAGG CGTGGACATT GACATTGATT ATATACGTTT TATTTTAATG
GATATTACCG GGCAGGTTGA ATTCAAGGAT AGGATATCCT GTGATTTCGC CCGGGCCGCA
TCTGAGTCCA TAAGGCTTAT GGAAGAAAAG ATAAGTGAAA TAATAAAAAT CCACAATATT
GAACATGACA GATTGCTTGG TGTAGGGGTA TCGGTTCCGG GAATGATTGA TAACCTTACA
CATGAGATAA TATTCGCACC GAATCTTGGT TGGGAACGCG TGAATCTGGA ACACATGATG
GACAGAATAG GAGATTTTCC TATATATGTT GATAATGAGG CCATGTGTTC TGCATTGTGT
GAGAACTGGA TAGGGTGCTG TATGGATGAA AGAGATTTTG TTTGCATAAA TATGAAGTCA
GGTATAGGCT CCAGTATATT TGCAGCTGGG AATCTTTACA GAGGCTGCTG CGGAAGTGCA
GGGGAGATAG GCCATATAAC GGTTGATCAA AACGGACCCA GATGTGCCTG CGGCAACTAC
GGCTGTCTTG AAGCATTGGT TTCAGCAAGG TCAATGGTTG AAAAGGCACA AAAATTAGTC
AGGCAAGGCT TGATAACAGA TTTTGAGGAT ATTGAAGCTA TTACGGTGGA TGAAATTTTC
AGACTGGCAC GAGAAGGAAA TGAGTCAGCG AGAGTAATTC TGGTAGAGGC AGCAGGATAT
CTAGGGCTTG CGATAGCAAA CCTTATAAAT ACTGTTAACC CTTCCAAGAT AGTTCTTGGA
AAAGAACTGG CCAAGTTTTC AGAAGATATT GTAGACCATC TGAAAAGTAT TGCATCTGCC
AAGGCACTGA AATACCCTGC GTCCAGAGTA CAAGTGGTTG TATCAAAAAT TGGAGAAGAC
ACCTCGGCTT TAGGTGCAGC AATAATACCA GTAAAAAAGC TCTTTGGCTA CAGGTTATAG
 
Protein sequence
MRMGKAGNNK LLKEINETSL LELIRINKQV SKAGLAQITG LSPTACGTIV TNLLDKGYIR 
EAGIGTSKGG RRPILYELTP GSYFSIGVDI DIDYIRFILM DITGQVEFKD RISCDFARAA
SESIRLMEEK ISEIIKIHNI EHDRLLGVGV SVPGMIDNLT HEIIFAPNLG WERVNLEHMM
DRIGDFPIYV DNEAMCSALC ENWIGCCMDE RDFVCINMKS GIGSSIFAAG NLYRGCCGSA
GEIGHITVDQ NGPRCACGNY GCLEALVSAR SMVEKAQKLV RQGLITDFED IEAITVDEIF
RLAREGNESA RVILVEAAGY LGLAIANLIN TVNPSKIVLG KELAKFSEDI VDHLKSIASA
KALKYPASRV QVVVSKIGED TSALGAAIIP VKKLFGYRL