Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3426 |
Symbol | |
ID | 7311988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3987858 |
End bp | 3989183 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610335 |
Product | glycoside hydrolase family 4 |
Protein accession | YP_002507694 |
Protein GI | 220930785 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAA TAACATTTAT GGGAGCCGGT AGTACTGTAT TTGCAAAAAA TGTACTGGGT GACAGCATGT GTTCGGAAGC TCTGGCAGAC TGTGAGATAA GGCTGTATGA CATCGCAGGT GATAGACTCA AGGAGTCTCA AATAATGCTG GAAGCGATAA ATAGAAATAT AAACGGGGGA AGGGCTAAAA TAAAAACCTA TCTAGGGGTC GAAAACAGAA AGGAAGCCCT CCGAAACGCT GATTTTATTG TAAATGCAAT TCAAGTGGGA GGATATGACC CTTGTACGAT TATTGATTTT GAGATTCCCA AAAAGTATGG ATTAAGACAA ACAATAGCAG ATACATTAGG AATCGGTGGA ATAATGCGTA CACTTAGGAC AATACCGGTT TTGGAGGACT TTGCAAGGGA TATTGAAGAA GTTTGTCCTA ATGCATGGTT CCTGAATTAT ACAAATCCTA TGGCTATGTT GACCGGATAT ATGCAGAGAT TTACCGGTGT AAAAACAATA GGACTATGCC ACAGTGTACA AGTTTGCTCA CAGGATTTGA TGAAGTCCCT GGGCATGGAA GACCGATTGG AAGGAAGAAA GGAATTGATA GCAGGTATAA ACCATATGGG ATGGCTGCTG GAGATATGCG ATAAGAACGG TAATGACCTT TACCCTGAGA TTAGAAGGCG TGCAAAAGAA AAGAATCAAA ATGAAAAGCA TAGTGACATG GTGAGATATG AGTATATAGA TAAACTGGGG TATTACTGCA CTGAATCAAG TGAACACAAC GCTGAATACA ATCCCTTTTT TATCAAATCC TCATATCCTG AACTTATAGA TAAGTTTAAC ATACCTCTTG ATGAATATCC GAGGAGATGC ATAGAACAGA TTCAAGAATG GAATAAACGC AGGGATGAAT TAATGAATAA CGAATACCTC ACTCATGAGA GATCAAATGA GTATGCATCC TATATTATGG AAGCTATTGT TACCAATAAG CCCTTCAAAA TAGGCGGAAA CGTTATTAAT AAAGGTGGTC TTATTGAGAA CCTTCCACAC GAGGCGTGTG TTGAAATACC TTGTATGGTT GATGGAATGG GGATTAATCC ATGTAGAGTG GGGCGGTTGC CTGTACAATT GGCAGCAATG AATATGACTA ACATCAACGT CCAGCTTTTA ACTATTGAAG CAGCAGCCAC TAGAAAGAAG GAGCACATTT ACCATGCAGC AATGCTGGAT CCGCACACTA GTGCTGAAAT GACTCTTGAT AACATAGTGA AAATGGTTGA TGAACTAATA GAGGCACATG GCAGTTGGCT TCCGAAATTT AAATAG
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Protein sequence | MVKITFMGAG STVFAKNVLG DSMCSEALAD CEIRLYDIAG DRLKESQIML EAINRNINGG RAKIKTYLGV ENRKEALRNA DFIVNAIQVG GYDPCTIIDF EIPKKYGLRQ TIADTLGIGG IMRTLRTIPV LEDFARDIEE VCPNAWFLNY TNPMAMLTGY MQRFTGVKTI GLCHSVQVCS QDLMKSLGME DRLEGRKELI AGINHMGWLL EICDKNGNDL YPEIRRRAKE KNQNEKHSDM VRYEYIDKLG YYCTESSEHN AEYNPFFIKS SYPELIDKFN IPLDEYPRRC IEQIQEWNKR RDELMNNEYL THERSNEYAS YIMEAIVTNK PFKIGGNVIN KGGLIENLPH EACVEIPCMV DGMGINPCRV GRLPVQLAAM NMTNINVQLL TIEAAATRKK EHIYHAAMLD PHTSAEMTLD NIVKMVDELI EAHGSWLPKF K
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