Gene Ccel_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3408 
Symbol 
ID7311970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3960144 
End bp3960695 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content38% 
IMG OID643610313 
Producthypothetical protein 
Protein accessionYP_002507676 
Protein GI220930767 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCA GTAAAATCAG AAAAATTACC ACAATGGGTG TTTTGGTGGC AATTTCAGTA 
ATACTTATAG TATCACCTTT AAAATTTCCA TTTCCCAGTG CACCATTCCT TGTGTACGAC
GCCGCAGATG TTTCCATTAT TATAGGTGGT TTTATTTTTG GACCAACTCA AGGTATTATT
CTCACTATTG TGACAGCTGT AGTACAAACC ATGTCTGACA GCTCAGGAGG AGGATGGATA
GGCTGTGTCA TGCACATTGT TGCTACATCA GCTCTGGTAT GTACCTCTTC TGTAATTTAT
TCAAGAAAAA GAACTCTTAA AAGTGCTGTT ATCGGTTTAA CACTTGGAAG TCTAGCAATG
ACCGTACTGA TGATACCAAT GAACATGATA TTTTACCCTT TGTTTGCAGG AACTCCTGTT
GATGCTGTAA TTAAAATGAT GGTCCCCGCC CTTCTTCCTT TCAATTTAAT GAAGGCAGGT
CTTAACTCAG TAATAGCCTT ATTGTTGTAC AAGTCATCAG GCAGACTATT AAGGCAAATA
GCCCTTAAAT AG
 
Protein sequence
MNSSKIRKIT TMGVLVAISV ILIVSPLKFP FPSAPFLVYD AADVSIIIGG FIFGPTQGII 
LTIVTAVVQT MSDSSGGGWI GCVMHIVATS ALVCTSSVIY SRKRTLKSAV IGLTLGSLAM
TVLMIPMNMI FYPLFAGTPV DAVIKMMVPA LLPFNLMKAG LNSVIALLLY KSSGRLLRQI
ALK