Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3404 |
Symbol | |
ID | 7311966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3952563 |
End bp | 3954167 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643610308 |
Product | hypothetical protein |
Protein accession | YP_002507672 |
Protein GI | 220930763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.515631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGGAA TGCCAATTTA TCAAGATTCT CCGACGAATC TAAAAAATCA GATTTTTGCA GCAAACGGAT CATCTGTAGT TAATGTTCAG GCTGACAATA CAGGTAGATT AAAGGTTGCA ACCGACAGTT CGTCCCCACT CGCTGTTGAC GTAGATGAAG CTGTAAACAG TATAACTGTT TATGGCAGTG ACGGTACAAG TAACCAAGTT TTAAGAACAA CTGCTACGGG TCAGCTGGAT ATCAGGCCTC TTACCGTTTC AGATACTGTC AATGTGAGTA TTACTCAAGC AGATGACAGT ATTACTGTCT ATGGTAATGA CGGTACTGCA AACCAGATAA TTAAAACTAA CTCCACAGGC CAACTGGATA TCAGACCTCT GACTTCTTCT GATACCGTCA GCGTTGATGT TTCCCAAGCT ACCGATAGTA TTGCTGTTTA TGGTAATGAC GGTACTGCAA ACCAGATAAT TAAAACTAAC TCCACAGGCC AACTGGATAT CAGACCTCTG ACTTCTTCTG ATACCGTCAG CGTTGATGTT TCTCAAGCTA CCGATAGTAT TGCTGTTTAT GGTAATGACG GTACTGCAAA CCAGATAATT AAAACTAACT CCACAGGCCA ACTGGATATC AGACCTCTGA CTTCTTCTGA TACCGTCAGC GTTGATGTTT CTCAAGCTAC CGATAGTATC GCTGTTTATG GTAATGACGG TACTGCAAAC CAGATAATTA AAACTAACTC CACAGGCCAA CTGGATATCA GACCTCTGAC TTCTTCTGAT ACCGTCAGTG TTGATGTTTC CCAAGCTACC GATAGTATCG CTGTTTATGG TAATGACGGT ACTGCAAACC AGATAATTAA AACTAACTCC ACAGGCCAAC TGGATATCAG ACCTCTGACT TCTTCTGATA CCGTCAGCGT TGATGTTTCC CAAGCTACCG ATAGTATTGC TGTTTATGGT AATGACGGTA CTGCAAACCA GATAATTAAA ACTAACTCCA CAGGCCAACT GGATATCAGA CCTCTGACTT CTTCTGATAC CGTCAGCGTT GATGTTTCTC AAGCTACCGA TAGTATCGCT GTTTATGGTA ATGACGGTAC TGCCAATCAG ATAATTAAAA CTAACTCCAC AGGCCAACTG GATATCAGAC CTCTGACTTC TTCCGATACC GTAAACGTTG ATATTTCTCA ATCTACCGAT AGTATTGCTG TATACGGTAG TGACGGTACT GCCAATCACG CTTTATTAAC TGATTCGGCC GGAATACTAC AGGTTAACAA TACCCGGACC TTTACAACTG CTACTCTTAC AACTTTAGAA ACAACAGACA GCTATCAATA TACAACCCAA CAGGAGATTG CTCAACTGAA CACCTATCAG TTCTTTGTAA AGAATACAGG AGATACAAAC AGTGTTACAC TTGTTGTTGA ATTGAGCCCA AATGGTACAG ACTGGGTAGT TGACAGTGAC GAACGTCCGA TTACCTTCGG GGCTGCAACA ATTATAACTT CGAACAAGTT CCTAAGATAT ATAAGATTAG GATACAAGTC CACAAGTACT GGTGCCAGCA CAACTATAAG TGCTATTTTC CAAGGCCAAG GCTAA
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Protein sequence | MPGMPIYQDS PTNLKNQIFA ANGSSVVNVQ ADNTGRLKVA TDSSSPLAVD VDEAVNSITV YGSDGTSNQV LRTTATGQLD IRPLTVSDTV NVSITQADDS ITVYGNDGTA NQIIKTNSTG QLDIRPLTSS DTVSVDVSQA TDSIAVYGND GTANQIIKTN STGQLDIRPL TSSDTVSVDV SQATDSIAVY GNDGTANQII KTNSTGQLDI RPLTSSDTVS VDVSQATDSI AVYGNDGTAN QIIKTNSTGQ LDIRPLTSSD TVSVDVSQAT DSIAVYGNDG TANQIIKTNS TGQLDIRPLT SSDTVSVDVS QATDSIAVYG NDGTANQIIK TNSTGQLDIR PLTSSDTVSV DVSQATDSIA VYGNDGTANQ IIKTNSTGQL DIRPLTSSDT VNVDISQSTD SIAVYGSDGT ANHALLTDSA GILQVNNTRT FTTATLTTLE TTDSYQYTTQ QEIAQLNTYQ FFVKNTGDTN SVTLVVELSP NGTDWVVDSD ERPITFGAAT IITSNKFLRY IRLGYKSTST GASTTISAIF QGQG
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