| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3393 |
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| Symbol | |
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| ID | 7312486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3934531 |
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| End bp | 3936354 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610297 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002507661 |
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| Protein GI | 220930752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.391866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT GGAAGGGGAT TTTTAGGCTT CTGAGCAGTC TGCAATGGAA GCTTGTATAT
ATTTTCGTTT CTATGTGTAT TATTCTGGTG TCCGTAGTAT ATGTGGTTAT TAATACAGGA
CTTCAGAATA TATATTATGA CAGCTTTGCA AACAGTATAG AGGCAGGATA TAATAACTGG
ATAGATGTAA GAGGCGGAGT TCCGGAATCA AATCAAAAAC TTTCGCAATA TTTTAATGAA
AGCGGGGATG CCCTTTTCTT TGGGGCAAAT TCCTCGTACC TTGGTATGAC AATAATTGAC
TTAACAAAAA TTCAGACTTC CAACGGAGGA ATTCTTTATT CGTCCGAAAA AGGTTATTCT
GATGAACCAG AGATATTTGC AGATCGTATT AAGACCAGTG AAAGTCTAAT GGCTATCTGG
GCGGGAAATA AACCCCAGAA AAATGAACGT CTCATTAAAG GTCCTAACGG CCAGTATTTT
GAATATATTA AGCAGCCGAA GGAAAATTTA ATTTTTTATT TTACCTATCA GGAGGAAGCA
TGGATAGCCA TATTGGAGAA GTTTAACTAT CTGATACTTT CCAGTGCCCT TATAGCAGTT
TTTTTATCGT TGGTTTTAGG ATACCTGCTT TCAAAAACGA TTACGTCTCC TATAATAAGT
GTTATGCACA AGGCTGAAAA AGTAGCTGAA GGAGACTTTG GAGAACAGCT TGCAGTGAAA
TCTGAGGATG AAATAGGTAA TCTGACAAAA ACCTTTAACT ATATGGCAGC CGAACTGAAA
AAAACATTGT CTGAAATCTC CAGTCAGAAA AACAAGGTTG AGACCATACT TAATTACATG
GCTGACGGTG TAATGGCTTT TGACCTGAAG GGAATGGCAA TCCACGCAAA CCCGGCTGCA
AGAAAGCTCC TTGGAAATGA CGCAGTGAGC CATCCTTTCA AAGAATTTGC CGTTAAGGTA
GGATTGGATG TAAGGATTGA AGATATAGTT TATTTTGAGG AATCCCCGGT GCGGGAATCT
GATACTATTA TAAATGATAT GTATGTAAAG GTGTATTTTG CCGTATTTAC GGATACCAAT
AAAAAGCCAG AAGGTATTAT TGTTGTACTT CATGATGCAA CGGAACAGCA AAAGCTTGAA
AGTATGAGGC GGGAGTTTGT TGCAAATGTT TCCCATGAAC TTCGCACACC AATTACTTCA
ATAAAAAGTT ACACTGAAAC TCTCTTGGAC GGTGCTGTAG AGGATCATGA AACATCAAAC
CGTTTCCTTA GCGTAATTGA TTCTGAAGCT GACAGAATGA CCAGACTTGT CAAGGATCTT
CTTCAACTAT CAAGATTGGA TAATCAGCAG ATGAATTGGA AAATAGAAAA AGTATCTCTG
GACGCCATGG TAAAAACCAT AGTTGAAAGA CTAAAAATTG AATCACAAAG AAAAAATCAA
AAGCTTGAAA GCTATGTAAT TGGTGATATT CCTGTAATAA ATGCCGACAA GGACAGACTG
GAACAAGTTG TAGTAAACCT TATAAGCAAT TCTATCAAGT ACACCGCTGA GTATGGTGAA
ATAACAGTTT ATGTGGGTAA GATTTACAAC GATGTATATA TGAAAGTTAC AGACAGCGGG
ATAGGAATTC CAGGTGAATC ACTGCCCAGA GTATTTGAAA GGTTCTACAG GGTGGACAAG
GCAAGGTCAA GAGATATGGG AGGTACAGGA TTAGGTCTAT CTATTGCCAA GGAAATTGTT
CAGGCACATG GCGGGACTAT AAATATATCC AGTGAAGTTG GAAAAGGTAC GGAGGTAGTC
GTCAAAATAC CACGTGCCAT GTAA
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| Protein sequence | MKFWKGIFRL LSSLQWKLVY IFVSMCIILV SVVYVVINTG LQNIYYDSFA NSIEAGYNNW
IDVRGGVPES NQKLSQYFNE SGDALFFGAN SSYLGMTIID LTKIQTSNGG ILYSSEKGYS
DEPEIFADRI KTSESLMAIW AGNKPQKNER LIKGPNGQYF EYIKQPKENL IFYFTYQEEA
WIAILEKFNY LILSSALIAV FLSLVLGYLL SKTITSPIIS VMHKAEKVAE GDFGEQLAVK
SEDEIGNLTK TFNYMAAELK KTLSEISSQK NKVETILNYM ADGVMAFDLK GMAIHANPAA
RKLLGNDAVS HPFKEFAVKV GLDVRIEDIV YFEESPVRES DTIINDMYVK VYFAVFTDTN
KKPEGIIVVL HDATEQQKLE SMRREFVANV SHELRTPITS IKSYTETLLD GAVEDHETSN
RFLSVIDSEA DRMTRLVKDL LQLSRLDNQQ MNWKIEKVSL DAMVKTIVER LKIESQRKNQ
KLESYVIGDI PVINADKDRL EQVVVNLISN SIKYTAEYGE ITVYVGKIYN DVYMKVTDSG
IGIPGESLPR VFERFYRVDK ARSRDMGGTG LGLSIAKEIV QAHGGTINIS SEVGKGTEVV
VKIPRAM
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