| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3385 |
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| Symbol | |
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| ID | 7311949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3926232 |
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| End bp | 3927593 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610289 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002507653 |
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| Protein GI | 220930744 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTA AGTACGTACA AGATATGACA GAAGGAAATG AAGCCAAACT TCTGATAAAG
TTTTCAATAC CAATGCTTAT TGGTAACATA TTTCAACAGT TTTATAATTT AATTAATTCA
GTTATTGTAG GAAAGTATAT AGGTGCTAAT GCTCTTGCAG CAGTAGGAGC TACGGCTTCT
CTAAACTTTC TGACATTTTC AATTTGTTTA GGGCTGTCCA TAGGAATTGG TATAATAATT
TCACAGTATT TTGGTGCAAA AAAAGAAGAA GATGTAAAGA GTGCTATAGC AAATGCAGTT
TATGTAATAG CCGTATCAGG TATAATTATG AGTATAATAA CCTGTTTGCT AGCCCGTCCT
ATATTACAAG TGATGAGGAC GCCTCATGAA ATTATTGATG ATTCGGTTAA GTTTCTGAGA
ATAACAGCGG GCGGTATGAT TGCAGTGGCA GCGTATAACG CCATAGCCGG AATACTAAGA
GCATTGGGAG ATTCGCGGAC ACCATTGATA TTTCTAATAC TATCTTGCGG GGTTAATGTC
GGGCTGGATT TGTTGTTTGT GCTGAAGTTT GGGTTTGGTG TTGCAGGAGC AGCATGTGCT
ACGGTTATAT CTCAGGCACT GGCGGCTTTG GGCTGTATTA TTTTCGCTAT AATGACCAAT
CCGTATTTTA AATTAAAAAA AGAGAATATG AAAATAAACT GGCCCATAAT TCAAAAATGT
ATAAAAATCG GGGTACCGGT TGCATTGCAA AACTCAATGA TTGCTATTTC ACTGGTAGCT
TTACAGAGCG TCGTAAATGG TTTTGGAAAG GTGGCTGTCG CTGCATATAC AGCAACCAGC
AGAGTAGAAC AACTTATAAT ACAGCCTTTT AACTCTTTAG GAGCGGCCAT GTCCACATTC
GCAGGGCAGA ATATGGGTGC AGGTAAGCTT GAACGCGTTA GAAAGGGATA TCGTAAGAGT
ATTATGATAG TTGGGGTTTT CAGCCTTTTA GCACTGTTGG CGGCCCAGTT TGGGGGCTAT
GCCATTATGA GTATGTTTGT TAAAGATTCG GATGTAATAG GCCTTGGAGC TAAAGCAATA
AAAATTACAA GTTGTATGTA TTTTGCTTTA GGTATGATAT ATGTAACAAG AGGAGTGTTA
AACGGTACCG GAGATGCGTT CTATTCTATG ATAAACGGTT TTGTAGAAGT TATAGGTAGG
GTTGGGTTTT CAACTGTCTT AGCAATGATT CCTACTATTG GAGTTTGGAG TATTTGGAGT
ACTACAGGAT TAACATGGGC TATTACTGCA ATTGCAAGTA TAATAAGATA CAGGCAGGGT
AAATGGAAAC ATAAATCGGT AGTTACCGAG AATCGGTCAT AA
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| Protein sequence | MSIKYVQDMT EGNEAKLLIK FSIPMLIGNI FQQFYNLINS VIVGKYIGAN ALAAVGATAS
LNFLTFSICL GLSIGIGIII SQYFGAKKEE DVKSAIANAV YVIAVSGIIM SIITCLLARP
ILQVMRTPHE IIDDSVKFLR ITAGGMIAVA AYNAIAGILR ALGDSRTPLI FLILSCGVNV
GLDLLFVLKF GFGVAGAACA TVISQALAAL GCIIFAIMTN PYFKLKKENM KINWPIIQKC
IKIGVPVALQ NSMIAISLVA LQSVVNGFGK VAVAAYTATS RVEQLIIQPF NSLGAAMSTF
AGQNMGAGKL ERVRKGYRKS IMIVGVFSLL ALLAAQFGGY AIMSMFVKDS DVIGLGAKAI
KITSCMYFAL GMIYVTRGVL NGTGDAFYSM INGFVEVIGR VGFSTVLAMI PTIGVWSIWS
TTGLTWAITA IASIIRYRQG KWKHKSVVTE NRS
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