| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3363 |
|---|
| Symbol | |
|---|
| ID | 7311929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3902681 |
|---|
| End bp | 3903343 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643610266 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_002507632 |
|---|
| Protein GI | 220930723 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA AGGTTATGAA AAACATAATG CATGCCAATG ACAGGCTTGC TGAGGAAAAT
AGAAATTATT TTAAAAGCAA GGGAATAAAG GCTGTTAATA TAATGGCATC ACCCGGTTCA
GGAAAGACTA GTGTTATTAT TAAACTTATA CAGGCTTTTG GAGATAGAGC AAATGTAGCT
GTAGTTGAAG GAGATATTGC TTCCTCAATT GATGCTGAAA AGATAGACAA GCTTGGCAAT
CCGGTTATCC AGATAAATAC AGGAGGCGGC TGCCATCTTG ATGCAAATAT GATAAAAAGT
GCTGCTGTGA GTCTGCGGCT CAAGGATGGA GCCATCCTTT TTATTGAAAA TGTAGGAAAT
CTTGTATGCC CTTCTTCCTT TGACCTTGGA GAAGGTATAA AAATGGTCAT TGCCAGTGTT
CCGGAGGGAC ATGACAAGCC GTACAAATAT ACCTCCATGT TTGAACTTGC TGATGTTGTA
GTGCTTAACA AGACAGATTT AATGCCTTAT ATCGACTTTG ATAAGGATAG CTTCTACAAA
GGCGTTAAGG CATTAAATGA AAAAGCAGAA ATTATTGAGG TATCATGTAA AACAGGTGAA
GGTATCAGTA AACTTGCAGA TTGGATGCTT AATGTGCAAG TATCTCATAA CCAGTCTGTG
TAA
|
|---|
| Protein sequence | MEIKVMKNIM HANDRLAEEN RNYFKSKGIK AVNIMASPGS GKTSVIIKLI QAFGDRANVA
VVEGDIASSI DAEKIDKLGN PVIQINTGGG CHLDANMIKS AAVSLRLKDG AILFIENVGN
LVCPSSFDLG EGIKMVIASV PEGHDKPYKY TSMFELADVV VLNKTDLMPY IDFDKDSFYK
GVKALNEKAE IIEVSCKTGE GISKLADWML NVQVSHNQSV
|
|---|
| |