| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3361 |
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| Symbol | |
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| ID | 7311927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 3900718 |
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| End bp | 3901839 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610264 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002507630 |
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| Protein GI | 220930721 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAAATA AAATTGTTAA AGAATTTGCA TCAACGGAAT CAAATTTCAT AGAAGATATA
ATAGATGGAA TGCAGGATTG GGTCAGAGTC ATAGACAGAG ACGGCAATAT TTTATTTGTC
AATAAACCAA TGTGCGAGGG TCTTGGCTAT AACGCTGTTG GTCGAAAATG CTACGAGGTA
CTTGGCCGTT CCTCACCTTG TGCTAATTGT ATATCCAGCC TGAAAGGTGA AAATATTCCT
AATTGCAAGG AAGAAACAAT AAACGGCCGC GTTTTTTCAG TAACAAGTTC GCCATTAAAA
AGTTTCCAAT CAAACAATGT AGAAGCTGTT ATTGAAGTAC TCCATGATAT AACAGAACTA
AAGATGTTAA GTCAGGAACT TGAAAAACAG AACGAACAAC TTAGAGAAGA CCTCTCCATA
GCCAGAAAAC TGCAATGTAG TCTTCTGCCA AAGCAGCAGT TTATAGGAGA TAAAATCAGC
TTCAGCTATA TTTATAAGCC CTGCGAAATG ATTGGCGGTG ATTTCCTTGA TATATTTGAA
ATTGACGAAG ACCATATAGG TATTTATATT GCTGATGTAT CAGGTCATGG TATTGCGGCA
TCTATGCTTA CAATGTTTTT GCGTGCAGCT ATAGACAAGT CCTCCCTTTC ACCGTCAAAG
GTGCTGACTC AACTCTACCA TGAGTTTAAT AAGAACGGAT TTGAGAACGA GCTTTATATT
TCCGTATTTT TTGGAATAAT AAATACATCT GACTATAGTT TTGCATACTC AAATGCCGGG
TTAAATGTAT CACCGGTTTT ATTTTCTGGC AATGAATTTA AGCTGCTGAG AGCCACAGGA
ATACCTATAA GCAACTGGGT GGATAAGCCT GAATATACGG AGGTAACACA AAAGCTTTCA
TCAAAGGACA GATTGCTATT CTTAACAGAT GGAATCATTG AGATTAAAAA CAAGTCCAGT
GAGCAGTTTG GAGAAGACAG AATCATAGAG CACTTATTAA AAAATGATTT AAAGCCTTCG
AGTTCGATAA CGAAGCTGGT AGATAAAGCA TTGGCCTTCT CCGGCAGCAG TATCCACGAC
ATAATGGACG ATATTACTGT AGCTTTACTG GAAATGAAAT AA
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| Protein sequence | MSNKIVKEFA STESNFIEDI IDGMQDWVRV IDRDGNILFV NKPMCEGLGY NAVGRKCYEV
LGRSSPCANC ISSLKGENIP NCKEETINGR VFSVTSSPLK SFQSNNVEAV IEVLHDITEL
KMLSQELEKQ NEQLREDLSI ARKLQCSLLP KQQFIGDKIS FSYIYKPCEM IGGDFLDIFE
IDEDHIGIYI ADVSGHGIAA SMLTMFLRAA IDKSSLSPSK VLTQLYHEFN KNGFENELYI
SVFFGIINTS DYSFAYSNAG LNVSPVLFSG NEFKLLRATG IPISNWVDKP EYTEVTQKLS
SKDRLLFLTD GIIEIKNKSS EQFGEDRIIE HLLKNDLKPS SSITKLVDKA LAFSGSSIHD
IMDDITVALL EMK
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