| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3334 |
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| Symbol | |
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| ID | 7312477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3878597 |
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| End bp | 3879727 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643610237 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_002507603 |
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| Protein GI | 220930694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0347475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATTAAAT TTGAAAATAT ATTCAAAAAA TACAAAGATA CAACTGTGTT GAAAAACATT
TCGCTGGAAG TTGAAAAAGG GCAATTGGTT TCACTTATCG GAGAAAGTGG CTGCGGTAAG
ACAACTACAT TAAAAATGAT TAATCGCCTG ATAAAGCCTT CGTCCGGCAA AATATTTATT
AATGGTAAGG ACATAGAAAA AAGAGATATT ATAAAGCTTA GAAGAAATAT GGGGTATGTA
ATTCAGCAGA CAGGGTTATT TCCACATATG ACAATAAAGG AAAATATTGA GCTAATCCCA
AAGGTCCAGA AAAAGGATTC TGAAGAAATA AGAAAAAAAA CTTATGAATT ATTGGAAATG
GTTGGGCTGG AAGCTGACGA GTTTCTTGAT AGGTACCCTT CTGAGATAAG TGGTGGGCAA
CAGCAGAGAG TTGGGGTAGC AAGAGCATTT GCAACTGACC CGGAGATTAT CCTGATGGAT
GAGCCGTTTT CAGCACTTGA TCCAATTACC AGGATAAGCC TGCAGGATGA GCTTATAAAT
ATACAGGCAA TTTATAAAAA GACAATAGTC TTTGTTACAC ATGACATGGA TGAGGCAATA
AAGATATCGG ATAAGATATG TATAATGAAA GATGGAGAAA TTCTTCAGTA TGATACACCT
GAAAATATAT TGAAAAATCC TCAGAATGAA TTTGTATCAG AGTTTGTAGG TAGAAATAGA
ATCTGGACTT CCCCCGAATT TATAAAGGCA AAGGATATTA TGATTGATAC CCCGGTAACC
TGTCAGAGCA GTACGACGCT TCTTGGGTGT ATTGAAAGAA TGCGTGTGGA AAAGGTAGAT
AGCCTTATGG TAGTTGAAGA AAAAACAAAA AGACTGTTAG GTATAGTGAA TGCAAAGCAA
ATACAAAACC AGAGAGACCG TACAATAAAA GTTGGCGATA TTATGACCAC TAACTTCCTG
AGTGTACTTG AGGACGACTC AATTATAGAT ATTTTAAAAA TTGTAGACGA AAAGCATGTA
TCAGCAATTC CTGTTTTGAA CGAAAGTGAC AGACTTTTAG GCTTGATAAC AAAGAGCAGT
CTTGTTACTA CTCTAAGCCA GCAATATCTT GATTTGGAAA ATCTGGAGTA A
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| Protein sequence | MIKFENIFKK YKDTTVLKNI SLEVEKGQLV SLIGESGCGK TTTLKMINRL IKPSSGKIFI
NGKDIEKRDI IKLRRNMGYV IQQTGLFPHM TIKENIELIP KVQKKDSEEI RKKTYELLEM
VGLEADEFLD RYPSEISGGQ QQRVGVARAF ATDPEIILMD EPFSALDPIT RISLQDELIN
IQAIYKKTIV FVTHDMDEAI KISDKICIMK DGEILQYDTP ENILKNPQNE FVSEFVGRNR
IWTSPEFIKA KDIMIDTPVT CQSSTTLLGC IERMRVEKVD SLMVVEEKTK RLLGIVNAKQ
IQNQRDRTIK VGDIMTTNFL SVLEDDSIID ILKIVDEKHV SAIPVLNESD RLLGLITKSS
LVTTLSQQYL DLENLE
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