| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3319 |
|---|
| Symbol | |
|---|
| ID | 7311891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3862595 |
|---|
| End bp | 3863239 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643610222 |
|---|
| Product | RNA polymerase factor sigma-70 |
|---|
| Protein accession | YP_002507588 |
|---|
| Protein GI | 220930679 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000496723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAACAA ACTTAAAGGC TGAGGTCTAT CAAACATATT CTGGTATGGT TGACGAAGAT
GTAATATTAG AAGCTAAAGC TGGTAATACA ATGGCTCTTG AATATCTCAT AAACAAGTAC
AAAAGCTTTG TCCGGGCAAA AGCCAGAACA TACTTTCTTA TAGGTGCTGA CAGAGAAGAT
ATCATTCAAG AAGGTATGAT TGGATTGTTT AAGGCGATCC GAGATTATAA GGGGGACAAG
CTTTCATCCT TCAGAGCGTT TGCGGAACTC TGCATTACCA GACAAATAAT TACTGCTATT
AAAACCGCTA CCAGACAGAA ACATATTCCG CTAAATTCAT ACGTTTCTTT AAATAAGCCC
ATTTTTGACG AAGAATCTGA CCGTACCTTG ATGGATATAA TCAGTGAGGA GAGTATAAGT
GATCCGGAAG AACTGATTAT AAACAGGGAA GAGTTCAAAG GTATAGAAAG TAAGATGGGT
GAAATTTTGA GTTCTCTTGA ATGGGAAGTA CTGACTTCAT ATTTGGATGG CAAGTCCTAC
CAAGAGATTG CCGAGGATTT GGATAGACAT GTAAAATCTA TCGACAACGC GTTACAGCGT
GTAAAACGTA AGTTAGAGAA ATATCTAGAA GAACAAAAAG CCTAA
|
|---|
| Protein sequence | MKTNLKAEVY QTYSGMVDED VILEAKAGNT MALEYLINKY KSFVRAKART YFLIGADRED
IIQEGMIGLF KAIRDYKGDK LSSFRAFAEL CITRQIITAI KTATRQKHIP LNSYVSLNKP
IFDEESDRTL MDIISEESIS DPEELIINRE EFKGIESKMG EILSSLEWEV LTSYLDGKSY
QEIAEDLDRH VKSIDNALQR VKRKLEKYLE EQKA
|
|---|
| |