Gene Ccel_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3307 
Symbol 
ID7311878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3853810 
End bp3855420 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content41% 
IMG OID643610208 
Producttype III restriction protein res subunit 
Protein accessionYP_002507576 
Protein GI220930667 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA GACCATATCA GCAAGAAGCG AAACAAGCGG TACTTAATGA ATGGGGCAAA 
GGCATTCTAA AAACTCTTTT GGTTCTTGTT ACTGGTGGAG GTAAAACCAT AGTATTCTCC
AAAATTACTG AAGAATGTGT TAGAAATGGT GAGCGGGTGT TAATACTTGC TCACCGTGGA
GAACTCCTTG ACCAGGCAGC AGATAAATTA AAAAAAGCTA CAAATCTAGG TTGTGCCACT
GAGAAAGCTG AAGAATCCTG TATCGGTAGT TGGTTTAGAG TAGTAGTAGG TTCTGTTCAA
TCTCTTATGA GAGAGAAGCG ACTCAATCAG TTTCCAAAAG ATTATTTTAA CACTATCATA
ATTGACGAAG CACATCATTG TCTGTCTGAC GGTTATCAAA GAGTTTTAAG CCATTTTAAC
GAAGCAAAAG TTTTAGGAGT AACAGCAACA CCTGACCGGG GAGATATGCG TAATTTAGGA
CAGTTTTTTG AATCACTGGC TTATGAATAT ACACTTCCAA GAGCTATAAA GGAGGGCTTT
CTCTGCCCGA TAAAAGCTCA AACTATTCCG TTAAAATTAG ATTTATCAGG GGTCAGTGTT
CAGGCTGGAG ATTTTAAAAA CGGTGACCTG GGCAACGCAC TGGAACCATA TCTCGAAAGT
ATAGCAGATG AAATGCTAAA ATGCTGTACG GACCATAAAA CTGTTGTATT CCTACCTCTT
ATCAAAACCA GTCAAAAGTT TAAAGACATA CTCAATAAAA AAGGCTTCAG GGCTGCTGAG
GTTAATGGAA ATAGTCAAGA TAGAGAACAG GTTTTAGCTG ATTTCGATTC TGGAAAATAC
AATGTCATTT GTAACTCTAT GTTGCTTACT GAAGGTTGGG ACTGTCCCAG CGTTGACTGT
ATTGTGGTCC TCCGACCTAC GAAAATCAGA AGCCTTTATG TTCAGATGGT GGGGCGCGGT
ACCCGACTAC ATTCTGGAAA AGACCACTTA CTATTGCTAG ATTTTTTATG GCACACTGAG
CGTCATGAAC TATGTCATCC AGCTGCATTA ATATGTGAAT CAGAAGAAGT AGCAAAGAAG
ATGACAGAAA ATATTGAGGC TGCTGGATGC CCGGTTGATA TAGAAGCAGC TGAAAAGCAG
GCAGCAGACG ATGTAGTTGC TCAAAGAGAG GAAGCTCTTG CAAAGAAACT GGCCGAGATG
AAAAACCGTA AACGTAAACT TGTGGATCCG CTACAGTTTG AAATGAGTAT TCAGGCTGAA
GACCTTGCTA GCTATGTACC GGCATTTGGT TGGGAAATGG GACCACCTTC TGACAAACAA
ATAAAGACTC TTGAGAAACT CGGTATATTC CCGGATGAAA TTGAAAGTGC TGGTAAAGCA
ACAAAGCTAC TTGAAAGACT TGATAAACGT AGAAATGAGG GATTAACAAC TCCAAAACAG
ATAAGGTTTT TGGAGGGACG AGGATTTCAG CATGTTGGTA CCTGGCAATT TGAAGGAGCA
AAGAGTCTTA TTGACCGAAT AGCTGCTAAT GGCTGGAGAG TACCTAACGA AATAAATCCA
TCGGAGTACA AACCGACACA GATAGAACAA CCACTTGGTT GGGAGATTTA A
 
Protein sequence
MELRPYQQEA KQAVLNEWGK GILKTLLVLV TGGGKTIVFS KITEECVRNG ERVLILAHRG 
ELLDQAADKL KKATNLGCAT EKAEESCIGS WFRVVVGSVQ SLMREKRLNQ FPKDYFNTII
IDEAHHCLSD GYQRVLSHFN EAKVLGVTAT PDRGDMRNLG QFFESLAYEY TLPRAIKEGF
LCPIKAQTIP LKLDLSGVSV QAGDFKNGDL GNALEPYLES IADEMLKCCT DHKTVVFLPL
IKTSQKFKDI LNKKGFRAAE VNGNSQDREQ VLADFDSGKY NVICNSMLLT EGWDCPSVDC
IVVLRPTKIR SLYVQMVGRG TRLHSGKDHL LLLDFLWHTE RHELCHPAAL ICESEEVAKK
MTENIEAAGC PVDIEAAEKQ AADDVVAQRE EALAKKLAEM KNRKRKLVDP LQFEMSIQAE
DLASYVPAFG WEMGPPSDKQ IKTLEKLGIF PDEIESAGKA TKLLERLDKR RNEGLTTPKQ
IRFLEGRGFQ HVGTWQFEGA KSLIDRIAAN GWRVPNEINP SEYKPTQIEQ PLGWEI