Gene Ccel_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3261 
Symbol 
ID7311837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3815510 
End bp3816259 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content37% 
IMG OID643610162 
ProductABC-2 type transporter 
Protein accessionYP_002507530 
Protein GI220930621 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAAACA TTCTGTGGAG AAATATAAAG TGGCGCTTTC AAAATCCTCT TTCCATTATA 
GTTACTATAT TGCAGCCGCT GATTTGGCTT GTAATGTATA GTGCTGTTGC AGGACAGGCG
ATGAAAAAAA CGGGCATCGG CAATTATACT GCTTTCATAT TACCCGGTAT CGTGGTTTTG
GTCACCTTTT CTGCCTGTAG CAGCGGAGGA ATAATTAATT TTATTATGAA ATCTAATGGA
AGCTTTTACA GGATTCTGAT TGCACCTGTT AAAAGAAAAG ATGTAGTACT GGGACAGATG
CTGGAGGCAA TACTGGTATC TTTTATAGAG GTAACTATTC TATTTGTTAT AAGTTTGTTG
TTTTCTGTAA GAGTAGGCTC AGGGTTTTTA GGAGTTTTAC TAATAATATT GCTTATCTTT
TTAACAGCTT TTTTCATGTC GGGCCTCGCA TATTTTATAA GCCTTTTACT TCCCAACGAA
GTCATCTATG AAACAATAAT GAATGCAATT GTACTTCCTA TTTTCTTCTT AAGTACTGCC
CTTTTTCCAC CTGAAAGTTT ATCCGGCGGA CTCGCCATTG CTGTAAATCT AAATCCATTT
ACTCATATAA TCAATTCTCT CAGAAGAATA ATATTGGGAG GGGAGCTATT AATAGCAGAC
ATACTCCCCG TAATTATACT CTTTACCGTA ATGTGCCTTG GGAGTTTTAT GCTTGCAATG
TGGAAACTGA AAAAAGAAAC TCTCCAATAG
 
Protein sequence
MLNILWRNIK WRFQNPLSII VTILQPLIWL VMYSAVAGQA MKKTGIGNYT AFILPGIVVL 
VTFSACSSGG IINFIMKSNG SFYRILIAPV KRKDVVLGQM LEAILVSFIE VTILFVISLL
FSVRVGSGFL GVLLIILLIF LTAFFMSGLA YFISLLLPNE VIYETIMNAI VLPIFFLSTA
LFPPESLSGG LAIAVNLNPF THIINSLRRI ILGGELLIAD ILPVIILFTV MCLGSFMLAM
WKLKKETLQ