Gene Ccel_3247 details

Gene Information

• Locus tag: Ccel_3247
• ID: 7311825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: -
• Start bp: 3793363
• End bp: 3800490
• Gene Length: 7128 bp
• Protein Length: 2375 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643610148
• Product: sugar-binding domain protein
• Protein accession: YP_002507516
• Protein GI: 220930607

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAA AAGTTATTAT GAAGATGGTT GCGGTAGTAG TAAGCGTTTG TATGTTACTT 
TCAACAGTAT TTCAAAGCGG AATAGCATAT GCGGCCGAAG ATGCTTCAAA CCTTGTTATA 
AGCGAAAGTC AAGTAAGCGG TGAGTATAAA TTTAACCTGA CTCAGGTTGG GGATATTGAC 
TGGTTGCATT TAAAGGGTGA CGGCTCAAAC GGAATTGTGC AGATCAAAAA GGATACTACA 
AATCCAAGTG CGATATCCTT TAATATACTG CCAAATTCCG TTCCCGAGGG TAAAGTCAGT 
AATGGGGATC CTGACCGCAT AGCTAACACA TGGTCAGACG GCATGGCCGG GTATGAATCA 
GGTACCGATG ATACGGGATT TGCTGTTTTA TTACCACCTG CTGATAATAG AGGTGCCGGA 
ACCTGCACTG AAAACGTAGG CTGGAATTTT TCGGTACAAG CACAGCCTGT CCAAACAACG 
GTTATATTTA CTTTGGGACT TTGGCAGGCA AATGTAGGTG TAAATTTCTA TATGGATGAC 
GTGCAGGTTG ATACGAAAAA TATATCAGCA GGCGGTGGTG CCCTGACTTT TAAATACCAA 
GTAACGGTAC CGGCAAATAA AGTATTGAAG GTTGAAGGTA TACAAACAGA TATCTTATGG 
CAGGATGGTA ATTCTTCAAT CTCAAGTATA GCCGTAAGCA GTGCGGTACT TGTTGATAAG 
GAGGCAATTC AAACTTTATA CAATAATGTC AAGGATATAG TACAAGGTTC CTATACGGAA 
GAAACCTGGA CAGTTTTTGA AAGTGCAAGA ACTACTGCCC AAGCTGTGCT TGACGATCCG 
AGTGCAACAC AGGACATGGT TGACAACGCA AAAACTGCAT TGGAACAAGC ACAGGCTGCT 
CTTGTGACCA ATAATGCAAA TGAACTAAAA ATTACCCAAA GTCAAGTAAG CGGCGAGTAT 
AAATTTAACC TGACTCAGGT TGGGGATATT GACTGGCTGC ATTTAAAGGG TGACGGCTCA 
AACGGAATTG TGCAGATCAA AAAGGATACT ACAAATCCAA GTGCAATATC CTTTAATATA 
CTGCCAAATT CCGTTCCTGA GGGTAAGGTT AGTAATGGGG ATCCTGACCG CATAGCTAAA 
ACATGGTCAG ACGGTATGGC CGGATATGAA TCAGGTACTG ACGATACGGG ATTTGCTGTT 
TTATCACCAC CTGTCGATAA TAGAGGTGCT GGAACCTGCA CTGAAAACGT GGGCTGGAAC 
TTTACGGTAT CAGCACAGCC TGTCCAAACA ACGGTTATAT TTACTTTGGG ACTTTGGCAG 
GCAAATGTAG GTGTAAATTT CTATATGGAT GACGTGCAGG TTGATACGAA AAATATATCA 
GCAGGCGGTG GTGCCCTGAC ATTTAAATAC CAAGTGACGG TACCGGCAAA TAAAGTATTG 
AAGGTTGAAG GTATACAAAC AGATATCTTA TGGCAGGACG GTAATTCTTC AATCTCAAGT 
ATAGCCGTAA GCAGTGTAGT ACCTGTTGAT AAGGAGGCAT TGCAAACTTT ATACAATAAT 
GTCAAGGATA TAGTTCAAGG TTCCTATACG GAAGAAACTT GGACGGTTTT TGAAAGTGCA 
AGAACTACTG CTCAAGCTGT ACTTGACGAT CCGAGTGCAA CACAGACCCT GGTTGACAAC 
GCAAAAACAT CATTGGAACA GGCACAGGCT GCTCTTGTGA CCAATAATGC AAATGAACTA 
AACGTTACTC AAAGCCAAAT AAACGGGGTG TATAACGTTG ATTTAACTGC GGTTGGAGAT 
GTTGACTGGC TGCATTTGAG AGGGGATGGC TCAAACAATA TTATTCAAAT TAAGAAGAAT 
ACTCAGAATG CCATTACATT CAGTGCACTC CAGAATACTG TTCCTGAGGG AAAAGAAACT 
AATGGGGATA CTAACCGTAC GGCTGCGTCT TGGACAGACG GAATGTCAGG TTATGAAGCA 
TTAGCCAATG ATACCGGATT CGGCGTTTTC CTACCTTTGT CAGATGATAG AGGTGCCGGT 
GCCTGTAAGG CAAATGTAGG CTGGAATTTT ACTATAGCAG CACAACCTAC TTCGACAACC 
GTTGTATTCA GCACTGGTCT CTGGCAGGCA AAAGTAAATG TAAACTTCTA TCTGGACGAT 
TTATATGTTT CAACTAAAAG TATGGAGGCT GGAGGCACTG CCCAAGCATT CAAATATCAG 
GTAGTTGTTC CGGCAAATAA AGTGTTAAAG GTTGTGGGTC TTCAAACATA TAAAAATGCC 
TATGATGGTA ATTCTTCATT GTCAACCATA GCAGTTAGCA GCCAAGAGAT TGCTGACAAG 
TCCTCATTAC AAGCATTTTA TGATGAATTT AGCGGAATAA CCCAAAGCTT TTTTACAGAT 
GCATCATGGA CAAACTTTAT TGATGCAAGA ACAGCTGCAA AAGCAGTCCT AGAAAAAGCC 
GTTGTGACAC AGGCAGAGGT TGATAATGCA AAAGCTGCCC TTATCTTGGC TCAGAATAAT 
CTTGTAAAAA AAGATACAAA TGTGATGATT GACTACACAG GTGGCAAAAG GGGCTCTAGT 
TATGGCCTGG GTAATCTTGT AGATGAGCAG GATAGATATC AGACCTTTAC ATCTAGTGAA 
GATTTTATAA TGGAGTATGT TCAAGTTGGA TTATATAAAA ATTCTGATGA CGGAAGTGAT 
TTGGTTGTAA AGCTGTATGC AACAGACAAT AATGGGCTTC CTACCGGATC GCCACTGGCT 
CAGACAACTG TCAATAAAAA AGATGTTATT AATGGCGGGT TAACTACTGC AAAACTTGTA 
TATGATGTAA AAGCCAATAC AAGGTATGCC ATAGATGTAA CTCAGACTAC CTTGAAAAAT 
GGTATGTATA ATTGGATAGT TATGCAAAAA AATCATTATA GCAAGAATGA ATTTTTCGGT 
AAGATTACAT CAGGAAAGTT TGTACCAGAG GCATGGCTTG GAACAGGCTT GTTAAGAGTT 
GTAAAAAAAA TAAATGTGGA TAGAAGTGCT CTAGAAGCTC TGGTATCAGA AGTAAGCAAT 
CTTAATGAAA AGATTTACAC AGTAGAATCC TGGCTGCATT TAGCCAACGC GGCAGAGGAA 
GCAAGAAATT GCCTGAATAA CTTCGATGCA TTGCAGGCGG AAATTGATGC TGAAACCGGA 
AAGCTTCAGG CTGCAAAAGA TAGTTTAGTT ATCAATATAA ACATATCTGA TTTCAGCAGT 
TTTATTTCAA GTTTTGATAA TATGGTAGTT AAAGGTTATA CAGATGCTTC TGTAGCTATA 
TTAACGGATG CAATTACAAA TGCGAAACAA TTGGACATCA GTGCTTCTGA TGATGAAAAG 
TTACAGGCCT ACGTATCTGT CCTAAATGCA ATTGCAAAAC TTCAGGTTTC AGGAAAATAT 
TCATCTGAGA CAGATGGAGG ATTGACTGGG TCATTTGGTT TTGAAGGTGA TATGAATGCT 
CCTATTGCCT TTATTGACGG CTCCTTTAGG TTGCCAAGCC GAGGTAATCT GATGATCAGA 
TTTGGTGTAA CAGGCCTTAA AGCAAAAGGA GTTTCAATTG ATTGGTATAA TAGAGACGGA 
TATTTGCCTT GCTATGTAAG TGAATACACG GTAGATGATG TTACATATAA AATTGAAGAG 
TTTGCCAATA AGCACACAAT AGACGGTAAC CCTGTGGAAG TTGCATATGT AAAAATGACG 
GCAATAAACA ATTCAAGTGA AAAACGTTTG CTTCCTGTTG TATCAAAGGA ATTAGTGCCG 
CTGAATAACG CAGCTGAATC ATCTTACGTT ATAAATGCAG GAGAAACAGT TGTAAGAGAG 
TATGCAATAA AAGCAGACAG GTTTGAGAAT GAAGGACACA CAGGGGAGAG GCACGAGGTA 
GAACCTAAAG CCCCGTTCCC AGCGGATCAG AAAATTCTTG AAGCTGCAAA AGCAGTTGCT 
GACATTGGTG AAAACAGTAT ATTTGAAAAT AATTATGCAT CGATGAAGAC ATACTGGGAT 
GACAGACTTG CAGGAATAAT AGATATAAAG ATGCCTAACA GCAAAGATGC AAATAATAAA 
GACAGTTTGG TAAATGCATA TAAGGCAGGG TATATCTATA CTCTTATAAT CAAGGATCAG 
ACATTTTTAC ATGTAGGTGA AAATGGATAT GATAGACTGT TTTCACACGA CACAATCGGG 
ATTTTGCAGT CCTTGATTAC AGCAGGAGAT TTTGTAGAAG CAAAAGATTA TCTTGAAAGT 
GTTCCCATGA CCGGCGGAAT AAACATTGAG AATGGTGAAG TAGATCCAGA CTTATATTGG 
GATGCAAACT GGAAATTACC ATGGGCATAC TCGGTATATT TAAGTAAAAC CGGAGATATT 
GATTTTATAA AAGAGAAATA TGAAGGTGTA CTTAAAAAGA TGGCACATTC TATTCATGAC 
GACCGTACAG GTCCAAACCA TGACGGAATT ATGAAAAGTA CTCTCGCCAT CGATACCTAC 
GGCCAATGGA CCGTTGATGA TCAGGCTGCA CTTATGGGAC TTATAGCTTA TAAATATATC 
TGTAACGAAT TGGCTATAAA GGAAAATGAC CAGAGCAAGA AAGAGTACTA CTTAGCAGAA 
GCTCAATGGG CAAATGCCGA ATACGACAGT TTACTAAAGG TGGTAACAGA AACACTTGAA 
AATACAATTA ACAGAAATAA TCTGAACTAT ATTCCGGCTT CAATAGTTGA ACCAAATACT 
GCAAACAGAT GTAATGATAT CAGAGATGGA AACTGGGCAT CAATGTTGTT ATTCGGATCA 
TTCCCATGGG ATGGATATCT GTATGGTGCG GATCAAAGCA AGGCCGGGGC TAATATAGAT 
ATGATAGACC AAACTTATGC ATATGGTATT GAAAGACGTA AAGACTTGCC GGGTGCTTCA 
CCTTATAATT TTGGAGGATA TCCTCATGGC TGGTATTCAA GCGCATACAA TGCGGGATAC 
GGTATTTCTG CACTTCGTGG TGAAGCTTAT AGAGATATAG GAATAAAAGC TTATGAATTT 
GCTGTAAACA GTGCCATGAG CTCACCGTTC GGCTGGTGGG AAGGTGTTGG ACCAGGAGGA 
AATGATTATC CATCGCAGGA TCCTACATCT CCACTTTGGA ACCGTGATAA TGCTTCAGGT 
GGCGGAGGTT CTTGCCAACA TATGTGGGGA CAGGCAACCG CATCCAAAGT TCTGTATGAT 
GCATTTATAG CTGAAAGAAT CTACAATGAT AATAAAAATG CGGAAATTAT TATCGGACGC 
GGTATTCCTA AAGAATGGGT AACTAATGCC ACAAATGAAA ATAACGTAGT TGCAGCTGTT 
GAAAACTATC CGATTCTTCA AGGCGGAAGA GCGGGATATA CAATTGTAAG AAATGGCAGC 
AATCTGAAAA TCACTTTTGA TTGCAACAAG ACAAATTCCA AAGTTGATGC GGGTACGGTG 
GAACAATGGA GTATTCAGCT CCCGGCGATG GTAAACAATA TATCTTCCGC TTCTGTTGGA 
ACAGTAGATA ATGCCAATGG TATTGTTAAC GTTCCAATAG ATACAAAGGA AGTTACAATT 
GTGCTTAAAG ATTTATTAGG AAGTTCTATG TCCATAGATA CTGTTTCATT ACCAAACGGC 
AAGGTTGGGG AAGCATATTC AAATGTATTA ACCGCGACAG GCGGAACGGT GCCGTATAAA 
TGGAGTGCTG AAGGACTTCC GGCAGGTCTG ACAATCACAA ATGAGGGAGA AATAAAAGGT 
ATTCCTACTG CAAGCGGTAC TTTTACTGTC AACATCAAAG TAGAGGACAG CAGTAATCCG 
ATATTGAGTA TTAGTAAAAC ATTAAGTATT ATTGTAGCTC CTGCTAATCA GCCCGGGGGT 
AGTACGGGAG ACACTAATGG AAGCACTGGA GAGAGTGTAA TTCCCGTTGA TTCCATCAGA 
AACGGTGATC GTACAATACT ATCAGTTTCA TTAAAAGCCA GCAACGAATC AGGAACAGCT 
TCGGCTAATA TTGGAAAAGC GATTGTTAAT GAGCTTGTAC AAAAAGCTAA GGAAGCTGAA 
AAGAACGGAC AGAAAGCAAC AGTTGAAATA AAACTTGATT CTGTCAAAGA CACAAAGTCA 
GTCAAGATAG GAGTTCCTGC GGAGTCGATA AAAGAAATTG CGGAAACTGC TGGAGCCGAG 
ATTAAGATTA ATACAAGAAT TGGAAGTGTT ATTTTTGATG CAAAAGCAAT AGACACAATC 
AATGCTTCTG CTTCATCCGG TAATGTAAAC ATTATTATAA GTAATGTACA AGCTTCTTCA 
TTATCAGAAG AAATAAGGGA TAAAGTGAGT GAACGGACAG TTTATGATTT CTCAATTCAA 
GCTGATAATA AAGAGATATC AGATTTTGGA GGAGGAACTG TCAGGGTTAG TGTACCTTAT 
GCTCCAAAAG TAAATGAAAA GCATAGTTCC ATAATAATCT ACGGAATAGA CAATGCCGGA 
GAACTGAGAA CAGTCAGAAG CATTTACAAC CCAGCTACAG GAACTGTTGA TTTCAAAGCC 
ACTCAGCCAT TACAGTATGT CGTCGGTTAC AATGAAGTCA ATTTCACTGA TGTCAAGGCG 
GATGCCTGGT ATGAAAAGGC TGTAGGATTC CTGGCGGCAA GAGAGATGGT AAGTGGCACA 
GGGGACGGTA GGTTTGCACC ACAGAATAAA GTTACCAGAG CAGATTTTCT CATAATGGTG 
ATGAATTCAT ATGGTATTAG GGCCGATAAG GCAGTGACAG AAAACTTTTC TGATGCCGGA 
AGCAAATACT ATACTGGTTA TCTGGGTACT GCAAAAAGAC TGGGCCTTGT TTCAGGAACT 
GGAGATAACA AATACATGCC AGAGGCGGCG ATAAGCAGAC AGGATATGCT TGTTATACTC 
TATCGTGCAC TGGATATACT TGGTGAATTA CCAGATGCAA AAACCGGAAA TTTTGACAGC 
TTCATCGACA CAAAGGATAT ATCGGGTTAT GCGGAAAACG CAATGAAGCT TTTTGTAAAA 
GCAGGTATTG TAATAGGGAA TGATAAACAA TTGAACCCAA AATCAGATAC ATCCAGAGCC 
GAGGCAGTAC AAGTAATGTA TAACCTGCTT TCCGGACAAG GAATATAA 

 

Protein sequence

MSKKVIMKMV AVVVSVCMLL STVFQSGIAY AAEDASNLVI SESQVSGEYK FNLTQVGDID 
WLHLKGDGSN GIVQIKKDTT NPSAISFNIL PNSVPEGKVS NGDPDRIANT WSDGMAGYES 
GTDDTGFAVL LPPADNRGAG TCTENVGWNF SVQAQPVQTT VIFTLGLWQA NVGVNFYMDD 
VQVDTKNISA GGGALTFKYQ VTVPANKVLK VEGIQTDILW QDGNSSISSI AVSSAVLVDK 
EAIQTLYNNV KDIVQGSYTE ETWTVFESAR TTAQAVLDDP SATQDMVDNA KTALEQAQAA 
LVTNNANELK ITQSQVSGEY KFNLTQVGDI DWLHLKGDGS NGIVQIKKDT TNPSAISFNI 
LPNSVPEGKV SNGDPDRIAK TWSDGMAGYE SGTDDTGFAV LSPPVDNRGA GTCTENVGWN 
FTVSAQPVQT TVIFTLGLWQ ANVGVNFYMD DVQVDTKNIS AGGGALTFKY QVTVPANKVL 
KVEGIQTDIL WQDGNSSISS IAVSSVVPVD KEALQTLYNN VKDIVQGSYT EETWTVFESA 
RTTAQAVLDD PSATQTLVDN AKTSLEQAQA ALVTNNANEL NVTQSQINGV YNVDLTAVGD 
VDWLHLRGDG SNNIIQIKKN TQNAITFSAL QNTVPEGKET NGDTNRTAAS WTDGMSGYEA 
LANDTGFGVF LPLSDDRGAG ACKANVGWNF TIAAQPTSTT VVFSTGLWQA KVNVNFYLDD 
LYVSTKSMEA GGTAQAFKYQ VVVPANKVLK VVGLQTYKNA YDGNSSLSTI AVSSQEIADK 
SSLQAFYDEF SGITQSFFTD ASWTNFIDAR TAAKAVLEKA VVTQAEVDNA KAALILAQNN 
LVKKDTNVMI DYTGGKRGSS YGLGNLVDEQ DRYQTFTSSE DFIMEYVQVG LYKNSDDGSD 
LVVKLYATDN NGLPTGSPLA QTTVNKKDVI NGGLTTAKLV YDVKANTRYA IDVTQTTLKN 
GMYNWIVMQK NHYSKNEFFG KITSGKFVPE AWLGTGLLRV VKKINVDRSA LEALVSEVSN 
LNEKIYTVES WLHLANAAEE ARNCLNNFDA LQAEIDAETG KLQAAKDSLV ININISDFSS 
FISSFDNMVV KGYTDASVAI LTDAITNAKQ LDISASDDEK LQAYVSVLNA IAKLQVSGKY 
SSETDGGLTG SFGFEGDMNA PIAFIDGSFR LPSRGNLMIR FGVTGLKAKG VSIDWYNRDG 
YLPCYVSEYT VDDVTYKIEE FANKHTIDGN PVEVAYVKMT AINNSSEKRL LPVVSKELVP 
LNNAAESSYV INAGETVVRE YAIKADRFEN EGHTGERHEV EPKAPFPADQ KILEAAKAVA 
DIGENSIFEN NYASMKTYWD DRLAGIIDIK MPNSKDANNK DSLVNAYKAG YIYTLIIKDQ 
TFLHVGENGY DRLFSHDTIG ILQSLITAGD FVEAKDYLES VPMTGGINIE NGEVDPDLYW 
DANWKLPWAY SVYLSKTGDI DFIKEKYEGV LKKMAHSIHD DRTGPNHDGI MKSTLAIDTY 
GQWTVDDQAA LMGLIAYKYI CNELAIKEND QSKKEYYLAE AQWANAEYDS LLKVVTETLE 
NTINRNNLNY IPASIVEPNT ANRCNDIRDG NWASMLLFGS FPWDGYLYGA DQSKAGANID 
MIDQTYAYGI ERRKDLPGAS PYNFGGYPHG WYSSAYNAGY GISALRGEAY RDIGIKAYEF 
AVNSAMSSPF GWWEGVGPGG NDYPSQDPTS PLWNRDNASG GGGSCQHMWG QATASKVLYD 
AFIAERIYND NKNAEIIIGR GIPKEWVTNA TNENNVVAAV ENYPILQGGR AGYTIVRNGS 
NLKITFDCNK TNSKVDAGTV EQWSIQLPAM VNNISSASVG TVDNANGIVN VPIDTKEVTI 
VLKDLLGSSM SIDTVSLPNG KVGEAYSNVL TATGGTVPYK WSAEGLPAGL TITNEGEIKG 
IPTASGTFTV NIKVEDSSNP ILSISKTLSI IVAPANQPGG STGDTNGSTG ESVIPVDSIR 
NGDRTILSVS LKASNESGTA SANIGKAIVN ELVQKAKEAE KNGQKATVEI KLDSVKDTKS 
VKIGVPAESI KEIAETAGAE IKINTRIGSV IFDAKAIDTI NASASSGNVN IIISNVQASS 
LSEEIRDKVS ERTVYDFSIQ ADNKEISDFG GGTVRVSVPY APKVNEKHSS IIIYGIDNAG 
ELRTVRSIYN PATGTVDFKA TQPLQYVVGY NEVNFTDVKA DAWYEKAVGF LAAREMVSGT 
GDGRFAPQNK VTRADFLIMV MNSYGIRADK AVTENFSDAG SKYYTGYLGT AKRLGLVSGT 
GDNKYMPEAA ISRQDMLVIL YRALDILGEL PDAKTGNFDS FIDTKDISGY AENAMKLFVK 
AGIVIGNDKQ LNPKSDTSRA EAVQVMYNLL SGQGI